RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 ANAPC5Q9UJX4 755 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 SLX4Q8IY92 1834 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 TEX28O15482 410 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 SNHG28P0DPA3 235 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 CLPPQ16740 277 aaPredicted RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 TMEM154Q6P9G4 183 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 CROCCP2Q86T23 111 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 LRRC71Q8N4P6 559 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 GFM2Q969S9 779 aaKnown RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 SLC35C1Q96A29 364 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 SPATA33Q96N06 139 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 INPP4AQ96PE3 977 aaPredicted RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 WDR18Q9BV38 432 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 METTL5Q9NRN9 209 aaKnown RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 TTC7AQ9ULT0 858 aaPredicted RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 AGAP1Q9UPQ3 857 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 TTLL3Q9Y4R7 772 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 TARSP26639 723 aaKnown RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 RARRES1P49788 294 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 BACE1P56817 501 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 FKBP1AP62942 108 aaKnown RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 XRCC4Q13426 336 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 COL19A1Q14993 1142 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 CDO1Q16878 200 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 C11orf74Q86VG3 221 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 PALM2Q8IXS6 379 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 SYN2Q92777 582 aaPredicted RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 KIAA1586Q9HCI6 787 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 KLHL11Q9NVR0 708 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 SLC12A6Q9UHW9 1150 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 USP15Q9Y4E8 981 aaPredicted RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 ALG6Q9Y672 507 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 MYH6P13533 1939 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 IGKV6D-41A0A0C4DH26 115 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 TMEM120BA0PK00 339 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 H7C0C1 242 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 MGEA5O60502 916 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 SPAG7O75391 227 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 ATP5OP48047 213 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 ACTR2P61160 394 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 BYSLQ13895 437 aaKnown RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 ZNF699Q32M78 642 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 ZNF667Q5HYK9 610 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 CCDC137Q6PK04 289 aaKnown RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 SCYL3Q8IZE3 742 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 C7orf57Q8NEG2 295 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 HEXIM2Q96MH2 286 aaKnown RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 TGS1Q96RS0 853 aaKnown RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 NR2E1Q9Y466 385 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 A6NJR5 290 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 SPDYE16A6NNV3 312 aaPredicted RBP11.09□□□□□ -0.63
VPS18-201ENST00000220509 TLR3O15455 904 aaKnown RBP11.09□□□□□ -0.63
VPS18-201ENST00000220509 HNRNPRO43390 633 aaKnown RBP11.09□□□□□ -0.63
VPS18-201ENST00000220509 DNAJC8O75937 253 aaPredicted RBP11.09□□□□□ -0.63
VPS18-201ENST00000220509 BRAFP15056 766 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 NPTX2P47972 431 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 EMC2Q15006 297 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 AGBL2Q5U5Z8 902 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 C6orf89Q6UWU4 347 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 RFX6Q8HWS3 928 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 CCHCR1Q8TD31 782 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 OLFML3Q9NRN5 406 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 TOPORSQ9NS56 1045 aaPredicted RBP11.09□□□□□ -0.63
VPS18-201ENST00000220509 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.09□□□□□ -0.63
VPS18-201ENST00000220509 TBX20Q9UMR3 447 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 TRAF3IP3Q9Y228 551 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 DPPA5A6NC42 116 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 CFAP73A6NFT4 308 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 C19orf81C9J6K1 198 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 RPS12P25398 132 aaKnown RBP11.09□□□□□ -0.63
VPS18-201ENST00000220509 CDK17Q00537 523 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 KCNMA1Q12791 1236 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 OR6B2Q6IFH4 312 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 BRSK2Q8IWQ3 736 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 CCDC110Q8TBZ0 833 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 ERP27Q96DN0 273 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 NAF1Q96HR8 494 aaKnown RBP11.09□□□□□ -0.63
VPS18-201ENST00000220509 RUNDC3BQ96NL0 473 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 GBP5Q96PP8 586 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 FAM118BQ9BPY3 351 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 PITPNM3Q9BZ71 974 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 MOSPD1Q9UJG1 213 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 ITGB1BP2Q9UKP3 347 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 PI4K2BG5E9Z4 385 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 TLR2O60603 784 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 BAG2O95816 211 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 TXNP10599 105 aaKnown RBP11.09□□□□□ -0.63
VPS18-201ENST00000220509 COMTP21964 271 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 EIF3BP55884 814 aaKnown RBP11.09□□□□□ -0.63
VPS18-201ENST00000220509 HSP90AA5PQ58FG0 334 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 TMEM35BQ8NCS4 154 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 TPCN2Q8NHX9 752 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 IL31RAQ8NI17 732 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 WDR60Q8WVS4 1066 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 STMN2Q93045 179 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 MCUR1Q96AQ8 359 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 C18orf8Q96DM3 657 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 BTBD6Q96KE9 485 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 EIF2AQ9BY44 585 aaKnown RBP11.09□□□□□ -0.63
VPS18-201ENST00000220509 PCSK1NQ9UHG2 260 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms