RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 RIMBP3Q9UFD9 1639 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 UBR2Q8IWV8 1755 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 USP17L10C9JJH3 530 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 WFS1O76024 890 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 CYP2C9P11712 490 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 PPP4CP60510 307 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 C1QBPQ07021 282 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 LAMC2Q13753 1193 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 PTPAQ15257 358 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 TIGD7Q6NT04 549 aaPredicted RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 C3orf62Q6ZUJ4 267 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 NT5DC4Q86YG4 428 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 UNC45BQ8IWX7 931 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 DDHD1Q8NEL9 900 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 FEZF2Q8TBJ5 459 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 PTPRN2Q92932 1015 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 TRIM63Q969Q1 353 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 PGBD4Q96DM1 585 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 EEF2KMTQ96G04 330 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 MAGEB10Q96LZ2 347 aaPredicted RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 EHD4Q9H223 541 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 NAGPAQ9UK23 515 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ATP11BQ9Y2G3 1177 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ADGRA2Q96PE1 1338 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 CNTNAP4Q9C0A0 1308 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 C1orf167Q5SNV9 1468 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 NUP188Q5SRE5 1749 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 H7C0S8 307 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 KRT75O95678 551 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 MYL4P12829 197 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 KRT20P35900 424 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 TMED10P49755 219 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 FXR1P51114 621 aaKnown RBP eCLIP4.6□□□□□ -1.67
CHD9-201ENST00000219084 ALDH18A1P54886 795 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 DSTYKQ6XUX3 929 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 CATSPER4Q7RTX7 472 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 APPL2Q8NEU8 664 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 NLRP4Q96MN2 994 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 CCT7Q99832 543 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SMARCAD1Q9H4L7 1026 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 EFCAB1Q9HAE3 211 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 CD209Q9NNX6 404 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 PRMT7Q9NVM4 692 aaPredicted RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 FAM32AQ9Y421 112 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 PIK3C2AO00443 1686 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SALL1Q9NSC2 1324 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SYNJ2BP-COX16A0A087WUM0 186 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ESYT3A0FGR9 886 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SLC16A4O15374 487 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 FBXO21O94952 628 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 GH2P01242 217 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 PSMC3P17980 439 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 PCSK1P29120 753 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ITGA8P53708 1063 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 PCBP1Q15365 356 aaKnown RBP eCLIP4.6□□□□□ -1.67
CHD9-201ENST00000219084 CCNG2Q16589 344 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ZCWPW2Q504Y3 356 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ZBTB33Q86T24 672 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 GSPT2Q8IYD1 628 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 WDR60Q8WVS4 1066 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 HIC2Q96JB3 615 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 COX16Q9P0S2 106 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ZNF229Q9UJW7 825 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 AFF2P51816 1311 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ANKRD12Q6UB98 2062 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ROBO3Q96MS0 1386 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 TOPAZ1Q8N9V7 1692 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SPDYE2BA6NHP3 402 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 PIK3CDO00329 1044 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 TRDMT1O14717 391 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 CAPN15O75808 1086 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ABHD2P08910 425 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SPDYE6P0CI01 402 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 NNMTP40261 264 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 MTFR1Q15390 333 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 CDO1Q16878 200 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 DALRD3Q5D0E6 543 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 EPHA10Q5JZY3 1008 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 KYAT3Q6YP21 454 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 ZNF34Q8IZ26 560 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 TMC2Q8TDI7 906 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 STARD8Q92502 1023 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 GPRASP2Q96D09 838 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 LRRC39Q96DD0 335 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 DACH2Q96NX9 599 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 CHP1Q99653 195 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 NT5C1AQ9BXI3 368 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 GDF3Q9NR23 364 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ARHGEF38Q9NXL2 777 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 CCDC195A0A1B0GUA6 201 aa4.59□□□□□ -1.67
CHD9-201ENST00000219084 APRTP07741 180 aa4.59□□□□□ -1.67
CHD9-201ENST00000219084 ACAT1P24752 427 aaKnown RBP4.59□□□□□ -1.67
CHD9-201ENST00000219084 CDC25AP30304 524 aa4.59□□□□□ -1.67
CHD9-201ENST00000219084 KCNK10P57789 538 aa4.59□□□□□ -1.67
CHD9-201ENST00000219084 TTC23LQ6PF05 361 aa4.59□□□□□ -1.67
CHD9-201ENST00000219084 TRIM65Q6PJ69 517 aa4.59□□□□□ -1.67
CHD9-201ENST00000219084 RAD9BQ6WBX8 426 aa4.59□□□□□ -1.67
CHD9-201ENST00000219084 TTLL6Q8N841 843 aa4.59□□□□□ -1.67
CHD9-201ENST00000219084 C7orf31Q8N865 590 aa4.59□□□□□ -1.67
CHD9-201ENST00000219084 C1orf54Q8WWF1 131 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms