RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ZNF252P-AS1Q0IIN9 211 aa31.43■■■□□ 2.62
PABPN1-201ENST00000216727 PIGHQ14442 188 aaPredicted RBP31.43■■■□□ 2.62
PABPN1-201ENST00000216727 LRIG3Q6UXM1 1119 aa31.43■■■□□ 2.62
PABPN1-201ENST00000216727 ZNF771Q7L3S4 317 aaPredicted RBP31.43■■■□□ 2.62
PABPN1-201ENST00000216727 TMC3Q7Z5M5 1100 aa31.43■■■□□ 2.62
PABPN1-201ENST00000216727 SNTG2Q9NY99 539 aa31.43■■■□□ 2.62
PABPN1-201ENST00000216727 USTQ9Y2C2 406 aa31.43■■■□□ 2.62
PABPN1-201ENST00000216727 VDRP11473 427 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 FLT3P36888 993 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 KLF1Q13351 362 aaPredicted RBP31.42■■■□□ 2.62
PABPN1-201ENST00000216727 DNAJB3Q8WWF6 145 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 EIF2AQ9BY44 585 aaKnown RBP31.42■■■□□ 2.62
PABPN1-201ENST00000216727 CYTH4Q9UIA0 394 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 GOLGA6CA6NDK9 693 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 TNPO2O14787 897 aaKnown RBP31.42■■■□□ 2.62
PABPN1-201ENST00000216727 HMGCRP04035 888 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 MYL3P08590 195 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 GOLGA6DP0CG33 693 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 YARSP54577 528 aaKnown RBP31.42■■■□□ 2.62
PABPN1-201ENST00000216727 MYO1EQ12965 1108 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 ZBTB6Q15916 424 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 CNGA2Q16280 664 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 KCTD19Q17RG1 926 aaPredicted RBP31.42■■■□□ 2.62
PABPN1-201ENST00000216727 SPDYCQ5MJ68 293 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 HOMER3Q9NSC5 361 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 GOLGA6AQ9NYA3 693 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 GRHL1Q9NZI5 618 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 WDR35Q9P2L0 1181 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 PARP2Q9UGN5 583 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 KIAA1257Q9ULG3 409 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 WDR3Q9UNX4 943 aaKnown RBP eCLIP31.42■■■□□ 2.62
PABPN1-201ENST00000216727 SNX24Q9Y343 169 aa31.42■■■□□ 2.62
PABPN1-201ENST00000216727 ECEL1O95672 775 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 UAP1Q16222 522 aaPredicted RBP31.41■■■□□ 2.62
PABPN1-201ENST00000216727 CYP4A22Q5TCH4 519 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 HERPUD2Q9BSE4 406 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 PASKQ96RG2 1323 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 SIGLEC16A6NMB1 481 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 ALKAL1Q6UXT8 129 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 CCDC50Q8IVM0 306 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 PPP1R13LQ8WUF5 828 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 TXLNGYQ9BZA5 131 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 FAM129AQ9BZQ8 928 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 PLAAQ9Y263 795 aa31.41■■■□□ 2.62
PABPN1-201ENST00000216727 TREHO43280 583 aa31.4■■■□□ 2.62
PABPN1-201ENST00000216727 PPFIA2O75334 1257 aa31.4■■■□□ 2.62
PABPN1-201ENST00000216727 RALAP11233 206 aa31.4■■■□□ 2.62
PABPN1-201ENST00000216727 HOXC8P31273 242 aa31.4■■■□□ 2.62
PABPN1-201ENST00000216727 BEX3Q00994 111 aa31.4■■■□□ 2.62
PABPN1-201ENST00000216727 OGDHQ02218 1023 aa31.4■■■□□ 2.62
PABPN1-201ENST00000216727 SNX17Q15036 470 aa31.4■■■□□ 2.62
PABPN1-201ENST00000216727 ZDHHC24Q6UX98 284 aa31.4■■■□□ 2.62
PABPN1-201ENST00000216727 C1orf54Q8WWF1 131 aa31.4■■■□□ 2.62
PABPN1-201ENST00000216727 ZMAT2Q96NC0 199 aaKnown RBP31.4■■■□□ 2.62
PABPN1-201ENST00000216727 OSBPL8Q9BZF1 889 aa31.4■■■□□ 2.62
PABPN1-201ENST00000216727 MICAL2O94851 1124 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 SSR1P43307 286 aaKnown RBP31.39■■■□□ 2.62
PABPN1-201ENST00000216727 RPL21P46778 160 aaKnown RBP31.39■■■□□ 2.62
PABPN1-201ENST00000216727 KCNJ1P48048 391 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 ORC1Q13415 861 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 FSCN1Q16658 493 aaKnown RBP31.39■■■□□ 2.62
PABPN1-201ENST00000216727 RCOR2Q8IZ40 523 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 FAM76AQ8TAV0 307 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 FNIP1Q8TF40 1166 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 CNTN3Q9P232 1028 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 FEZ2Q9UHY8 353 aaPredicted RBP31.39■■■□□ 2.62
PABPN1-201ENST00000216727 KRT14P02533 472 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 CETN2P41208 172 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 NDST1P52848 882 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 DHX9Q08211 1270 aaKnown RBP31.39■■■□□ 2.62
PABPN1-201ENST00000216727 LLGL1Q15334 1064 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 SYDE1Q6ZW31 735 aaPredicted RBP31.39■■■□□ 2.62
PABPN1-201ENST00000216727 NME8Q8N427 588 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 ARL8AQ96BM9 186 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 RBM41Q96IZ5 413 aaKnown RBP31.39■■■□□ 2.62
PABPN1-201ENST00000216727 DCLK3Q9C098 648 aa31.39■■■□□ 2.62
PABPN1-201ENST00000216727 C17orf102A2RUQ5 167 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 F8VP50 259 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 H0YGN5 161 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 GNAT1P11488 350 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 AKR1A1P14550 325 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 GABRB2P47870 512 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 SREBF2Q12772 1141 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 ZNF268Q14587 947 aaPredicted RBP31.38■■■□□ 2.61
PABPN1-201ENST00000216727 TTMPQ5BVD1 217 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 HEXIM2Q96MH2 286 aaKnown RBP31.38■■■□□ 2.61
PABPN1-201ENST00000216727 CPXM1Q96SM3 734 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 NFS1Q9Y697 457 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 TRIP11Q15643 1979 aa31.38■■■□□ 2.61
PABPN1-201ENST00000216727 KRT3P12035 628 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 GPD2P43304 727 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 PLTPP55058 493 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 PURAQ00577 322 aaKnown RBP31.37■■■□□ 2.61
PABPN1-201ENST00000216727 CRHR2Q13324 411 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 LRRC52Q8N7C0 313 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 BEST2Q8NFU1 509 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 FBXO25Q8TCJ0 367 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 GRK7Q8WTQ7 553 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 TMEM40Q8WWA1 233 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 NT5C1AQ9BXI3 368 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms