RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 IL18RAPO95256 599 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 NPTXRO95502 500 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ITGA4P13612 1032 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 LSP1P33241 339 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 CDH8P55286 799 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 CLDN10P78369 228 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 RNF187Q5TA31 235 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 KCTD16Q68DU8 428 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 DCUN1D2Q6PH85 259 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ZNF677Q86XU0 584 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 IQCF2Q8IXL9 164 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 TMEM130Q8N3G9 435 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 TSEN2Q8NCE0 465 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 B4GALNT2Q8NHY0 566 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ZIM3Q96PE6 472 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 UVRAGQ9P2Y5 699 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 AMACRQ9UHK6 382 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 GGA2Q9UJY4 613 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 NFU1Q9UMS0 254 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 SART1O43290 800 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ADCY6O43306 1168 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 RAD51CO43502 376 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ITGBL1O95965 494 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ASS1P00966 412 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 CFHP08603 1231 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 SMIM10L2AP0DMW4 78 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 SMIM10L2BP0DMW5 78 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 GJA8P48165 433 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 FNTAP49354 379 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 YARSP54577 528 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 YWHAEP62258 255 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ENPEPQ07075 957 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 PAK2Q13177 524 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 TMEM132DQ14C87 1099 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 TSNAXIP1Q2TAA8 658 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 OLFML2BQ68BL8 750 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 AADACL2Q6P093 401 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ARFGAP2Q8N6H7 521 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 C7orf31Q8N865 590 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 DNAJB3Q8WWF6 145 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ZNF606Q8WXB4 792 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 KRT35Q92764 455 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 TRIM11Q96F44 468 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 HES6Q96HZ4 224 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 PLVAPQ9BX97 442 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 FLRT1Q9NZU1 646 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 MIF4GDA9UHW6 222 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 GLI1P08151 1106 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 HOXC6P09630 235 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 MCF2P10911 925 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ZNF24P17028 368 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 POLR2BP30876 1174 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 MFSD10Q14728 455 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 EMC10Q5UCC4 262 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 MAATS1Q7Z4T9 603 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 SLFN11Q7Z7L1 901 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 SAPCD2Q86UD0 394 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 SESTD1Q86VW0 696 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 IFNL1Q8IU54 200 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 MCOLN2Q8IZK6 566 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 IQCKQ8N0W5 287 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 ACTRT1Q8TDG2 376 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 DDX1Q92499 740 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 KATNBL1Q9H079 304 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 DPH5Q9H2P9 285 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 PDZD7Q9H5P4 517 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 PARP2Q9UGN5 583 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 HES2Q9Y543 173 aa9.42□□□□□ -0.9
MTHFD1-201ENST00000216605 GOLGA6L10A6NI86 522 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 GOLGA8SH3BPF8 625 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 P4HA1P13674 534 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 NR1D1P20393 614 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 MARCKSL1P49006 195 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 CARSP49589 748 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 CPT1AP50416 773 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 GNASQ5JWF2 1037 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 GLRA4Q5JXX5 417 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 CPNE8Q86YQ8 564 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 TMEM35BQ8NCS4 154 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 EMID1Q96A84 441 aaPredicted RBP9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 RMDN2Q96LZ7 410 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 MRPL47Q9HD33 250 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 MTUS1Q9ULD2 1270 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 PIN4Q9Y237 131 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 COL1A2P08123 1366 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 GOLGA6L7A0A1B0GV03 622 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 A6NJR5 290 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 SRRM3A6NNA2 597 aaPredicted RBP9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 GJB6O95452 261 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 KRT14P02533 472 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 ZNF200P98182 395 aaPredicted RBP9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 TRIM72Q6ZMU5 477 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 TTC30AQ86WT1 665 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 CD302Q8IX05 232 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 SH2D3CQ8N5H7 860 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 C1orf131Q8NDD1 294 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 OLIG1Q8TAK6 271 aa9.41□□□□□ -0.9
MTHFD1-201ENST00000216605 ALG3Q92685 438 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms