RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Kbtbd3Q8BHI4 607 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Rmdn2Q8BSE0 410 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Q8CD60 292 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Onecut3Q8K557 490 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Trim33Q99PP7 1142 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Lrrc18Q9CQ07 262 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ifrd2Q9D8U0 441 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Rgs1Q9JL25 209 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 XkQ9QXY7 446 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Cyp4f40G3UW81 524 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Zbtb11G5E8B9 1050 aaKnown RBP7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Aoc3O70423 765 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 C1qbP14106 253 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Alppl2P24823 529 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Mmp13P33435 472 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Usp10P52479 792 aaKnown RBP7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Bop1P97452 732 aaKnown RBP7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Fam117bQ3U3E2 584 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Spag6Q3V0U9 509 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Olfml2bQ3V1G4 746 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Aldh1a2Q62148 518 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Clec7aQ6QLQ4 244 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Chsy1Q6ZQ11 800 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Slc36a3Q811P0 477 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Arhgap28Q8BN58 729 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Fate1Q8CEK7 99 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Plcg2Q8CIH5 1265 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Trim61Q8JZK6 461 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Sh2d5Q8JZW5 429 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Spire2Q8K1S6 718 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Cpa5Q8R4H4 436 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Tceal1Q921P9 165 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Trim34aQ99PP6 485 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Psmd8Q9CX56 353 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ddx56Q9D0R4 546 aaKnown RBP7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Hes6Q9JHE6 224 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Sh3tc1G3X9F6 1346 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Gli3Q61602 1583 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Robo3Q9Z2I4 1366 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 A0A1Y7VP24 259 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ttc30a2A2AKQ8 664 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 GabreA2AMW3 916 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 NuggcD3YWJ0 796 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Nmt1O70310 496 aaKnown RBP7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Foxk1P42128 719 aaKnown RBP7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Pdcd2P46718 343 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Gad2P48320 585 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Caprin2Q05A80 1031 aaKnown RBP7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Plk1Q07832 603 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Slfn4Q3UV66 602 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Tigd5Q499M4 642 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Arid3aQ62431 601 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Nup93Q8BJ71 819 aaKnown RBP7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Uba6Q8C7R4 1053 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 CnstQ8CBC4 711 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 ThtpaQ8JZL3 224 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Pacs1Q8K212 961 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 OscarQ8VBT3 265 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Hdhd5Q91WM2 419 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Snapc2Q91XA5 359 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Gbp7Q91Z40 638 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 St5Q924W7 1134 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ttc30a1Q99J38 664 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ttc30bQ9CY00 664 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 ParvgQ9ERD8 331 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 IdeQ9JHR7 1019 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Thap11Q9JJD0 305 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Tsga8Q9JJL0 238 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Dbn1Q9QXS6 706 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Dnaja2Q9QYJ0 412 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Dcun1d1Q9QZ73 259 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Atp11cQ9QZW0 1129 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Tns3Q5SSZ5 1440 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Cyth3O08967 399 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Dusp8O09112 663 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Stra6O70491 670 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Lire1P11260 357 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Pik3caP42337 1068 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ppp3ccP48455 513 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Gbp10Q000W5 611 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Slc17a7Q3TXX4 560 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Rsrp1Q3UC65 298 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Thoc7Q7TMY4 204 aaKnown RBP7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ppm1kQ8BXN7 372 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Dus1lQ8C2P3 475 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ccdc17Q8CE13 565 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Klhl36Q8R124 613 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Vmn1r213Q8R278 384 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Nmrk1Q91W63 195 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Asb11Q9CQ31 323 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Thg1lQ9CY52 298 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Sh2d4aQ9D7V1 421 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 1700018B08RikQ9DA83 213 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Arhgef7Q9ES28 862 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Mmp19Q9JHI0 527 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Tagln3Q9R1Q8 199 aa7.97□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Grin3aA2AIR5 1135 aa7.96□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Anxa8O35640 327 aa7.96□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Cbfa2t2O70374 594 aa7.96□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Pik3r1P26450 724 aa7.96□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms