RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Pcsk9Q80W65 694 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Oas1gQ8K469 367 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Scube2Q9JJS0 997 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Col1a1P11087 1453 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Unc13dB2RUP2 1085 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ccdc8D3YZV8 685 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gnat1P20612 350 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 SPINDOCQ05AH6 381 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 R3hdm4Q4VBF2 262 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Slain1Q68FF7 579 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ppp2r2aQ6P1F6 447 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 B3galnt2Q8BG28 504 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Acvr1cQ8K348 493 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Prl2c5Q9JLV9 222 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mup10A2BIN1 180 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mup14A2CEK7 180 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mup19A9C497 187 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mup15A9R9W0 180 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mup17B5X0G2 180 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mup8E9PVW0 235 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mup7E9QA79 235 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Fgf15O35622 218 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rdh7O88451 316 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mup6P02762 180 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mup1P11588 180 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mup2P11589 180 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Krt35Q497I4 455 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Dlg4Q62108 724 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Olfml3Q8BK62 406 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Bri3bpQ8BXV2 253 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rftn2Q8CHX7 500 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Pcdhgc5Q91XW9 944 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Msi2Q920Q6 346 aaKnown RBP12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Oxct1Q9D0K2 520 aaKnown RBP12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Scyl3Q9DBQ7 735 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tlr9Q9EQU3 1032 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cntnap2Q9CPW0 1332 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 TroapB7ZNG4 668 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Krt90E9Q1Z0 538 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Zfy2P20662 777 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Vmn2r43Q80Z08 845 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Zmym6Q8BS54 1249 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ppp1r3aQ99MR9 1089 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Akap11E9Q777 1895 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Eno3P21550 434 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Nkx2-5P42582 318 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 PgfP49764 158 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ano7Q14AT5 859 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Trim71Q1PSW8 855 aaKnown RBP12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ccndbp1Q3TVC7 356 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ccnt2Q7TQK0 723 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ip6k2Q80V72 448 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Map1sQ8C052 973 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Shisa4Q8CA71 197 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Dusp19Q8K4T5 220 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Fam114a2Q8VE88 497 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ttll6A4Q9E8 822 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 FancfE9Q5Z5 343 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Barx2O08686 283 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Hoxb8P09632 243 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ptpn11P35235 597 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Il6stQ00560 917 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Zc3h15Q3TIV5 426 aaKnown RBP12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cspg5Q71M36 566 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Efcab14Q8BGQ6 484 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Pkn2Q8BWW9 983 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Trpv6Q91WD2 767 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Hdhd5Q91WM2 419 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Pard3bQ9CSB4 1203 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Usp29Q9ES63 869 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gm45208A0A140LJ36 292 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 DgkhD3YXJ0 1156 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Lonrf1D3YY23 762 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Smyd1P97443 490 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 CkbQ04447 381 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 DstykQ6XUX1 927 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 SugctQ7TNE1 436 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Olfr698Q7TRN4 311 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Dhx32Q8BZS9 744 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Vps39Q8R5L3 886 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tmprss4Q8VCA5 435 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Olfr532Q8VGT4 309 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 CenpsQ9D084 142 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Itpripl1A2ASA8 547 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Atp2c2A7L9Z8 944 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Apol11bE9PUZ0 337 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 MafP54843 370 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Npas2P97460 816 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Atxn7l3bQ3UD01 97 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ildr1Q8CBR1 537 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ccdc137Q8R0K4 290 aaKnown RBP12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Olfr30Q8VGD8 315 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Alg13Q9D8C3 1166 aaKnown RBP12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 DmgdhQ9DBT9 869 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Znhit2Q9QY66 399 aa12.43□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Zfp846G3X996 541 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Acot1O55137 419 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cops2P61202 443 aaKnown RBP12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Heatr9Q5QNV8 569 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tbx2Q60707 711 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms