RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Pdk1Q8BFP9 434 aaKnown RBP10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Osbpl6Q8BXR9 959 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ttc39bQ8BYY4 617 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Alg9Q8VDI9 611 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Snx9Q91VH2 595 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Alkbh1P0CB42 389 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 NfixP70257 488 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Cspg5Q71M36 566 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 CyldQ80TQ2 952 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 MydgfQ9CPT4 166 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ndufa13Q9ERS2 144 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Slc6a16A0A1L1SR47 742 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 C2cd2E9Q3C1 696 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Rfpl4bJ3QPR6 266 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ap2a2P17427 938 aaKnown RBP10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Fkbp1aP26883 108 aaKnown RBP10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Afg1lQ3V384 480 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Thnsl1Q8BH55 747 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Sun2Q8BJS4 731 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Fbxo9Q8BK06 437 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ino80bQ99PT3 375 aaKnown RBP10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Klhl28Q9CR40 571 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ndufaf1Q9CWX2 328 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 GOLGA7BQ9D428 167 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Actl7aQ9QY84 440 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Deaf1Q9Z1T5 566 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Mzf1S4R1L6 814 aa10.25□□□□□ -0.77
Syne1-201ENSMUST00000041639 Arhgap33Q80YF9 1305 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Klf6O08584 283 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 S100a9P31725 113 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Olfm4Q3UZZ4 505 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ddx3xQ62167 662 aaKnown RBP10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Slc44a2Q8BY89 706 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 AvenQ9D9K3 342 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Trip4Q9QXN3 581 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Dctn3Q9Z0Y1 186 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Cdc42bpaQ3UU96 1719 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Igsf9bE9PZ19 1328 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Rhbdl2A2AGA4 302 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Cdh18E9Q9Q6 790 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ankrd42Q3V096 527 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ripor1Q68FE6 1223 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 ChfrQ810L3 664 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pcmtd2Q8BHD8 359 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Fam102bQ8BQS4 339 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ldlrap1Q8C142 308 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Wdr47Q8CGF6 920 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 OplahQ8K010 1288 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Nsl1Q8K305 281 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pcdha9Q91Y11 979 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 S100pbpQ9D5K4 396 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Stau1Q9Z108 487 aaKnown RBP10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Patl2A2ARM1 529 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Magea1O89006 320 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Magea5O89009 320 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Atp13a4Q5XF90 1193 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Efl1Q8C0D5 1127 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Lrrc46Q9DAP0 323 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Asah2Q9JHE3 756 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Tob2Q9JM55 345 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Magea2Q9R2A2 320 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gbp11A9YVJ5 442 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gm2832F7AEC7 200 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 2210016F16RikG3X8U3 338 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gm3755K7N743 167 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Hsd17b1P51656 344 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Rit2P70425 217 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Q14AM7 275 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pak5Q8C015 719 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ston1Q8CDJ8 730 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pip4k2cQ91XU3 421 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 NgrnQ99KS2 293 aaKnown RBP10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Rabl3Q9D4V7 236 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Trpc7Q9WVC5 862 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Atp8b4A2ANX3 1194 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Arhgef26D3YYY8 869 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Cdh2P15116 906 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Slc11a2P49282 568 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Kcna5Q61762 602 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Asnsd1Q8BFS9 627 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Afg3l2Q8JZQ2 802 aaKnown RBP10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Slc25a38Q91XD8 326 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Sh2d4aQ9D7V1 421 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 PlekQ9JHK5 350 aaKnown RBP10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 Mroh2aD3Z750 1679 aa10.24□□□□□ -0.77
Syne1-201ENSMUST00000041639 EloblA6PWE0 161 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Oog1E9Q5G7 496 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Atf6F6VAN0 656 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 CrymO54983 313 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pcsk1P63239 753 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ptprn2P80560 1001 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Smcr8Q3UMB5 935 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Tmem260Q8BMD6 703 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 CinpQ9D0V8 212 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Atp5oQ9DB20 213 aaKnown RBP10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 LactbQ9EP89 551 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Scgb2b18A0A087WPA9 112 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gm8298J3QPI0 401 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Adcy1O88444 1118 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Csn1s1P19228 313 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms