RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Cyp4f40G3UW81 524 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Cntn3Q07409 1028 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Togaram2Q3TYG6 1002 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Zscan4fQ3URS2 506 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Garnl3Q3V0G7 1038 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ifnl2Q4VK74 193 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Grm6Q5NCH9 871 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Shroom1Q5SX79 823 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ssxb5Q6XAS2 159 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 HpseQ6YGZ1 535 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 March4Q80TE3 409 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Zscan4cQ80VJ6 506 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Znf579Q80VM4 562 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Apol7cQ8C6E1 369 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ccdc80Q8R2G6 949 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Wrap53Q8VC51 532 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Stx18Q8VDS8 334 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Nphs1Q9QZS7 1256 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Diaph3Q9Z207 1171 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Cntnap4Q99P47 1310 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ccdc170D3YXL0 722 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Rasgrf2P70392 1189 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ubn1Q4G0F8 1135 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Prr18Q6PAN7 307 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Chsy1Q6ZQ11 800 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 OafQ8QZR4 282 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tspan8Q8R3G9 235 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Nek8Q91ZR4 698 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Klf15Q9EPW2 415 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 B020011L13RikA0A087WQI7 412 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 NumblO08919 604 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Fgf15O35622 218 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Impa1O55023 277 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Myl1P05977 188 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Serping1P97290 504 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 FaxcQ3UMF9 409 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Itga1Q3V3R4 1179 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Capn3Q64691 821 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Cdc14aQ6GQT0 603 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ankzf1Q80UU1 748 aaKnown RBP15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Serpinb13Q8CDC0 389 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Lonp1Q8CGK3 949 aaKnown RBP15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Emc2Q9CRD2 297 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Atp6v1c1Q9Z1G3 382 aa15.75■□□□□ 0.11
Nup54-201ENSMUST00000038514 Gm3460E9QAI8 215 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Dpysl4O35098 572 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 PigrO70570 771 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Icam1P13597 537 aaKnown RBP15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Kif5aP33175 1027 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 BtkP35991 659 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Rbp3P49194 1234 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Arl4cP61208 192 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 PhbP67778 272 aaKnown RBP15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mark3Q03141 753 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Cyp2j11Q3UNV2 504 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Spag6Q3V0U9 509 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Syn2Q64332 586 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Kcnk18Q6VV64 394 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Vat1lQ80TB8 417 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Nlrp4aQ8BU40 982 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Arl8bQ9CQW2 186 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tmem68Q9D850 329 aa15.74■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mup10A2BIN1 180 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mup14A2CEK7 180 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mup19A9C497 187 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mup15A9R9W0 180 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Olfr310B2RVZ1 332 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mup17B5X0G2 180 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Vmn2r59E9PUT5 865 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mup8E9PVW0 235 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mup7E9QA79 235 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mup6P02762 180 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mup1P11588 180 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mup2P11589 180 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Aimp1P31230 310 aaKnown RBP15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tff2Q03404 129 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 DselQ0VBN2 1207 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Arhgap45Q3TBD2 1116 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Slc17a7Q3TXX4 560 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Zfp953Q3UPV7 304 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tgfbrap1Q3UR70 860 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Naif1Q6PFD7 327 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Lsm8Q6ZWM4 96 aaKnown RBP15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Wdtc1Q80ZK9 677 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 SowahcQ8C0J6 512 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Usp33Q8R5K2 909 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Bcs1lQ9CZP5 418 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ddx56Q9D0R4 546 aaKnown RBP15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 CsadQ9DBE0 493 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tm9sf1Q9DBU0 606 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tsc1Q9EP53 1161 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Kifc1Q9QWT9 674 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Scnn1bQ9WU38 638 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Adgrf2E9Q4J9 644 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 AunipE9Q6Z5 340 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 RpsaP14206 295 aaKnown RBP15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Hmgb2P30681 210 aaKnown RBP15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ptk2P34152 1090 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Actr2P61161 394 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Rpl22P67984 128 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 126.8 ms