RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Pms2P54279 859 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Grb7Q03160 535 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 RalgdsQ03385 852 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Lrrn4clQ3TYX2 239 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Mylk3Q3UIZ8 795 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ugt3a1Q3UP75 523 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Dpysl3Q62188 570 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Trpm4Q7TN37 1213 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Nsun6Q7TS68 476 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Wdr35Q8BND3 1181 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ttc39bQ8BYY4 617 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Dhx36Q8VHK9 1001 aaKnown RBP14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Mxra7Q9CZH7 178 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Slxl1Q9D515 155 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Paip2Q9D6V8 124 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ccdc22Q9JIG7 627 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Crlf3Q9Z2L7 442 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ccdc13D3YV10 709 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gcnt4E9Q649 455 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Cd70O55237 195 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 CtshP49935 333 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 SftpbP50405 377 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gxylt1Q3UHH8 404 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 B4galnt4Q766D5 1034 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Rimbp2Q80U40 1072 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tmem39bQ810L4 492 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 SowahcQ8C0J6 512 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Caap1Q8VDY9 356 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Kdm4bQ91VY5 1086 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Setd3Q91WC0 594 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Rabep2Q91WG2 554 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gps1Q99LD4 471 aaKnown RBP14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Cetn2Q9R1K9 172 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ly75Q60767 1723 aa14.11□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tcp11x2A2AEI7 503 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ttc17E9PVB5 1198 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Kbtbd2G3X9X1 623 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 PklrP53657 574 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Rasgrf2P70392 1189 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Trim72Q1XH17 477 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gm8773Q3UQ24 132 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tom1l2Q5SRX1 507 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Pik3r5Q5SW28 871 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Frmd5Q6P5H6 517 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 NfascQ810U3 1240 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 B3glctQ8BHT6 489 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tubgcp5Q8BKN5 1024 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Il33Q8BVZ5 266 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Arfip2Q8K221 341 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 OafQ8QZR4 282 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tekt2Q922G7 430 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Sh2d3cQ9QZS8 854 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Plekhg4A0A1L1SU27 1217 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Adgrf2E9Q4J9 644 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Pcdh9F8VPK8 1237 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Zfp715G3X9T1 886 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gm10436L7N1Y3 520 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Fam71e2L7N480 754 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Cdh16O88338 830 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 PdgfaP20033 211 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Drg1P32233 367 aaKnown RBP14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Capn13Q3UW68 665 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ampd1Q3V1D3 745 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ubn1Q4G0F8 1135 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Acvrl1Q61288 502 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tgoln2Q62314 363 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Nipa1Q8BHK1 323 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Q9CPS8 106 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Rpa3Q9CQ71 121 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Sun1Q9D666 913 aaKnown RBP14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 1700016D06RikQ9DAA5 166 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Igdcc4Q9EQS9 1252 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Fem1bQ9Z2G0 627 aa14.1□□□□□ -0.15
Nup88-201ENSMUST00000035283 Mocs3A2BDX3 460 aaKnown RBP14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gm3460E9QAI8 215 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 DldO08749 509 aaKnown RBP14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Nr3c1P06537 783 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 AlplP09242 524 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 HalP35492 657 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Pdcd2P46718 343 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Srebf2Q3U1N2 1130 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gm29609Q3UU56 907 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Wdr18Q4VBE8 431 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 PterQ60866 349 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Dzip3Q7TPV2 1204 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 PolnQ7TQ07 864 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ccnt2Q7TQK0 723 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Chmp2bQ8BJF9 213 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gtf3c2Q8BL74 907 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Trip10Q8CJ53 603 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Npm3Q9CPP0 175 aaKnown RBP14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Nsmce3Q9CPR8 279 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Slc25a11Q9CR62 314 aaKnown RBP14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 DpysQ9EQF5 519 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Rdh14Q9ERI6 334 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Slc13a1Q9JHI4 594 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Diaph3Q9Z207 1171 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Slc8a3S4R2P9 928 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Zscan4-ps1A0A1C7CYV3 506 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Zscan4dA7KBS4 506 aa14.09□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms