RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Arhgap33Q80YF9 1305 aa11.29□□□□□ -0.6
Ciita-201ENSMUST00000023147 SprtnG3X912 497 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rfpl4bJ3QPR6 266 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rgs2O08849 211 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rgs4O08899 205 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Pdk4O70571 412 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Akr1b7P21300 316 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Cdo1P60334 200 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Spout1Q3UHX9 385 aaKnown RBP11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Odr4Q4PJX1 447 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Hspa1aQ61696 641 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Wdr91Q7TMQ7 748 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Actl9Q8CG27 415 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Phc3Q8CHP6 981 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Cul3Q9JLV5 768 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Map3k15A2AQW0 1331 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Tubb1A2AQ07 451 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gbp11A9YVJ5 442 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Tada2bD3Z4Z0 420 aaKnown RBP11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm3187M0QWW3 260 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 C2P21180 760 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Cd19P25918 547 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Kcnn2P58390 839 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Fam193bQ3U2K0 892 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rnf10Q3UIW5 804 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Ifit3Q64345 403 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Senp6Q6P7W0 1132 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Cspg5Q71M36 566 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 SgczQ8BX51 311 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 NcaphQ8C156 731 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Lrrc42Q8R2U7 421 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 NcaldQ91X97 193 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Iqcf1Q9D9K8 182 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Nrxn3Q6P9K9 1571 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Robo1O89026 1612 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Farp1F8VPU2 1048 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Sema4dO09126 861 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Nol4P60954 483 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 FancbQ5XJY6 703 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Pip5kl1Q6U7H8 395 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Slc6a15Q8BG16 729 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Zhx3Q8C0Q2 951 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Ttc16Q8C1F5 767 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Fbxw7Q8VBV4 629 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rab14Q91V41 215 aaKnown RBP11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Twf1Q91YR1 350 aaKnown RBP11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Bbs2Q9CWF6 721 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Tmem39aQ9CYC3 486 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Tomm70Q9CZW5 611 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Hic1Q9R1Y5 733 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm3371F7CQW8 167 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Celf1P28659 486 aaKnown RBP11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Cyp2c37P56654 490 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Nfe2Q07279 373 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Wdr41Q3UDP0 460 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Zfp341Q6PGC9 846 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Nckap1lQ8K1X4 1134 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Swi5Q8K3D3 89 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Mtmr4Q91XS1 1190 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Pcdha11Q91Y19 950 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Ugp2Q91ZJ5 508 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Wdr64Q9D565 1086 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Cib4Q9D9N5 185 aa11.28□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm29276A0A087WNW5 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm21117A0A087WPJ9 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm20820A0A087WPP3 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm20937A0A087WQA3 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm21258A0A087WQC7 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm28102A0A087WQL3 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm21095A0A087WR14 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm20792A0A087WRF5 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm21865A0A087WRL2 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm28576A0A087WRP6 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm28490A0A087WRT9 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm21294A0A087WS79 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm20824A0A087WS97 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm21996A0A087WSS9 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm28870A0A0A6YW38 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm29866A0A0A6YX04 222 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Serpinb2P12388 415 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Msx3P70354 204 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Axdnd1Q3UZ57 424 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm21627Q810R0 219 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Brd8Q8R3B7 951 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rpa1Q8VEE4 623 aaKnown RBP11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Stx11Q9D3G5 287 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Krt16Q9Z2K1 469 aa11.27□□□□□ -0.6
Ciita-201ENSMUST00000023147 Znf609Q8BZ47 1413 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Cd40lgP27548 260 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rbp3P49194 1234 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Kpnb1P70168 876 aaKnown RBP11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Qrich1Q3UA37 777 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Pid1Q3UBG2 217 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Fam8a1Q3URQ4 399 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Arl13bQ640N2 427 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Gm5414Q6IFZ8 552 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Krt73Q6NXH9 539 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Sarm1Q6PDS3 724 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 SnphQ80U23 495 aa11.27□□□□□ -0.61
Ciita-201ENSMUST00000023147 Proser2Q8C5R2 471 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms