RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 1810065E05RikQ5NC41 235 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Cd180Q62192 661 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Otud6aQ6IE21 290 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Mpp4Q6P7F1 635 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Hmgb4Q6P8W9 181 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Znf579Q80VM4 562 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Gm3411Q8C7R2 150 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Lrit1Q8K099 624 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Hars2Q99KK9 505 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Rmi1Q9D4G9 616 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Chit1Q9D7Q1 464 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Rnf19bA2A7Q9 732 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Atp8b4A2ANX3 1194 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Fbln2P37889 1221 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Smcr8Q3UMB5 935 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Spdye4aQ5IBH6 268 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Scaf8Q6DID3 1268 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Fam49aQ8BHZ0 323 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Agap1Q8BXK8 857 aaKnown RBP13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Sept11Q8C1B7 431 aaKnown RBP13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Prpf31Q8CCF0 499 aaKnown RBP13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Emc2Q9CRD2 297 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Fam187aQ9D3R5 417 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Scyl3Q9DBQ7 735 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Shcbp1Q9Z179 668 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Krt16Q9Z2K1 469 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Zscan4-ps1A0A1C7CYV3 506 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Zscan4dA7KBS4 506 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Pdzrn4E9PUZ9 1014 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 CtshP49935 333 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Npas2P97460 816 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 D630036H23RikQ3UQD6 204 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Zscan4fQ3URS2 506 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Scarf1Q5ND28 820 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Caprin1Q60865 707 aaKnown RBP13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Raver2Q7TPD6 673 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Zscan4cQ80VJ6 506 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Armc6Q8BNU0 468 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Dnali1Q8BVN8 258 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Sh3rf3Q8C120 878 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 TwnkQ8CIW5 685 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Nr3c2Q8VII8 978 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 BrdtQ91Y44 956 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Taf7lQ9D3R9 471 aa13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Fip1l1Q9D824 581 aaKnown RBP13.25□□□□□ -0.29
Msh6-201ENSMUST00000005503 Lipo2D3YY49 398 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Zc3h7aE9PWW6 970 aaKnown RBP13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Cdh16O88338 830 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Serpinh1P19324 417 aaKnown RBP13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Elk3P41971 409 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 TdgP56581 421 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Gngt2Q61017 69 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Clip4Q8CI96 704 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Afg3l2Q8JZQ2 802 aaKnown RBP13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 FdpsQ920E5 353 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Fam49bQ921M7 324 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 XkQ9QXY7 446 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Kif9Q9WV04 790 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Hcn2O88703 863 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 AmhP27106 555 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Stmn1P54227 149 aaKnown RBP13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Olfm3P63056 478 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Ptprn2P80560 1001 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Fbln1Q08879 705 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Znf507Q6ZPY5 941 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Unc45bQ8CGY6 931 aaKnown RBP13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Basp1Q91XV3 226 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Tlr9Q9EQU3 1032 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Tk2Q9R088 270 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Gabbr1Q9WV18 960 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 SynrgQ5SV85 1306 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Rad51ap2G3UW63 976 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Actr2P61161 394 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Zfp956Q3UZY6 572 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 NostrinQ6WKZ7 506 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Fra10ac1Q8BP78 315 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Daam1Q8BPM0 1077 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Pcdhb7Q8CDY9 829 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Rilpl2Q99LE1 197 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Dgcr8Q9EQM6 773 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 Angptl2Q9R045 493 aa13.24□□□□□ -0.29
Msh6-201ENSMUST00000005503 StrnO55106 780 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Slc12a1P55014 1095 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Psg29Q3URN6 468 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Foxred2Q3USW5 665 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Shroom1Q5SX79 823 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Q6GQV0 436 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Olfr670Q7TRP3 312 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 RubcnQ80U62 956 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Btnl9Q8BJE2 536 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Ppp4r4Q8C0Y0 875 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Pdk3Q922H2 415 aaKnown RBP13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Txnrd3Q99MD6 652 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Cnga3Q9JJZ8 631 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Kifc1Q9QWT9 674 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Ptpn4Q9WU22 926 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Arhgef37A1IGU4 676 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Rap1gds1E9Q912 607 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 TyrobpO54885 114 aa13.23□□□□□ -0.29
Msh6-201ENSMUST00000005503 Pias1O88907 651 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms