RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C DPB2P24482 689 aaPredicted RBP2.74□□□□□ -1.97
SDS3YIL084C PDX3P38075 228 aaKnown RBP2.74□□□□□ -1.97
SDS3YIL084C VPS55P47111 140 aa2.74□□□□□ -1.97
SDS3YIL084C HAM1P47119 197 aaKnown RBP2.74□□□□□ -1.97
SDS3YIL084C YGL159WP53110 370 aa2.74□□□□□ -1.97
SDS3YIL084C PRM8P53174 237 aa2.74□□□□□ -1.97
SDS3YIL084C NRK1P53915 240 aa2.74□□□□□ -1.97
SDS3YIL084C OST6Q03723 332 aa2.74□□□□□ -1.97
SDS3YIL084C ELP6Q04868 273 aa2.74□□□□□ -1.97
SDS3YIL084C HOR7Q05827 59 aa2.74□□□□□ -1.97
SDS3YIL084C YMR316C-AI2HB70 103 aa2.73□□□□□ -1.97
SDS3YIL084C RPL25P04456 142 aaKnown RBP2.73□□□□□ -1.97
SDS3YIL084C TFC1P32367 649 aa2.73□□□□□ -1.97
SDS3YIL084C TMA19P35691 167 aaKnown RBP2.73□□□□□ -1.97
SDS3YIL084C SKG1P36169 355 aa2.73□□□□□ -1.97
SDS3YIL084C RTT105P40063 208 aa2.73□□□□□ -1.97
SDS3YIL084C FMP33P46998 180 aa2.73□□□□□ -1.97
SDS3YIL084C SWT21P53873 357 aaPredicted RBP2.73□□□□□ -1.97
SDS3YIL084C HHT1P61830 136 aa2.73□□□□□ -1.97
SDS3YIL084C VBA1Q04301 562 aa2.73□□□□□ -1.97
SDS3YIL084C ADF1Q2V2Q1 113 aa2.73□□□□□ -1.97
SDS3YIL084C PET494P07390 489 aaPredicted RBP2.72□□□□□ -1.97
SDS3YIL084C UBC8P28263 218 aa2.72□□□□□ -1.97
SDS3YIL084C HEK2P38199 381 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
SDS3YIL084C MRPL49P40858 161 aaPredicted RBP2.72□□□□□ -1.97
SDS3YIL084C YJL144WP47009 104 aa2.72□□□□□ -1.97
SDS3YIL084C GAL83Q04739 417 aa2.72□□□□□ -1.97
SDS3YIL084C HUT1Q12520 339 aa2.72□□□□□ -1.97
SDS3YIL084C TDH1P00360 332 aaKnown RBP2.71□□□□□ -1.98
SDS3YIL084C ERG2P32352 222 aa2.71□□□□□ -1.98
SDS3YIL084C PPQ1P32945 549 aa2.71□□□□□ -1.98
SDS3YIL084C CBT1P36038 271 aaPredicted RBP2.71□□□□□ -1.98
SDS3YIL084C ECM4P36156 370 aa2.71□□□□□ -1.98
SDS3YIL084C NRG2P38082 220 aa2.71□□□□□ -1.98
SDS3YIL084C POP8P38208 133 aa2.71□□□□□ -1.98
SDS3YIL084C DLS1P40366 167 aa2.71□□□□□ -1.98
SDS3YIL084C TTI2P47168 421 aa2.71□□□□□ -1.98
SDS3YIL084C CCC1P47818 322 aa2.71□□□□□ -1.98
SDS3YIL084C TOS8P53147 276 aa2.71□□□□□ -1.98
SDS3YIL084C YNL095CP53932 642 aa2.71□□□□□ -1.98
SDS3YIL084C SNZ1Q03148 297 aa2.71□□□□□ -1.98
SDS3YIL084C MIX17Q03667 156 aa2.71□□□□□ -1.98
SDS3YIL084C SPC2Q04969 178 aa2.71□□□□□ -1.98
SDS3YIL084C YLR283WQ05867 314 aa2.71□□□□□ -1.98
SDS3YIL084C YOR289WQ12012 251 aaPredicted RBP2.71□□□□□ -1.98
SDS3YIL084C BBP1Q12365 385 aa2.71□□□□□ -1.98
SDS3YIL084C RPL24AP04449 155 aaKnown RBP2.7□□□□□ -1.98
SDS3YIL084C ATG22P25568 528 aa2.7□□□□□ -1.98
SDS3YIL084C PRS4P38063 326 aaPredicted RBP2.7□□□□□ -1.98
SDS3YIL084C PET100P38958 111 aa2.7□□□□□ -1.98
SDS3YIL084C HSK3P69852 69 aa2.7□□□□□ -1.98
SDS3YIL084C YOR186WQ08560 144 aa2.7□□□□□ -1.98
SDS3YIL084C PRR2Q12310 699 aa2.7□□□□□ -1.98
SDS3YIL084C YOR192C-CQ3E736 78 aa2.7□□□□□ -1.98
SDS3YIL084C ADK1P07170 222 aaKnown RBP2.69□□□□□ -1.98
SDS3YIL084C SDH4P37298 181 aa2.69□□□□□ -1.98
SDS3YIL084C YBL081WP38180 368 aaKnown RBP2.69□□□□□ -1.98
SDS3YIL084C ECM33P38248 429 aaKnown RBP2.69□□□□□ -1.98
SDS3YIL084C SSH1P38353 490 aaKnown RBP2.69□□□□□ -1.98
SDS3YIL084C DDI1P40087 428 aa2.69□□□□□ -1.98
SDS3YIL084C RIO2P40160 425 aaKnown RBP2.69□□□□□ -1.98
SDS3YIL084C PAM16P42949 149 aa2.69□□□□□ -1.98
SDS3YIL084C ERJ5P43613 295 aaPredicted RBP2.69□□□□□ -1.98
SDS3YIL084C TAD2P47058 250 aa2.69□□□□□ -1.98
SDS3YIL084C MIG2P53035 382 aa2.69□□□□□ -1.98
SDS3YIL084C YGL088WP53151 121 aa2.69□□□□□ -1.98
SDS3YIL084C TIM21P53220 239 aa2.69□□□□□ -1.98
SDS3YIL084C CAB4P53332 305 aa2.69□□□□□ -1.98
SDS3YIL084C ALG9P53868 555 aaKnown RBP2.69□□□□□ -1.98
SDS3YIL084C YMR315WQ04869 349 aaKnown RBP2.69□□□□□ -1.98
SDS3YIL084C NMA1Q06178 401 aaKnown RBP2.69□□□□□ -1.98
SDS3YIL084C HEM25Q07534 307 aa2.69□□□□□ -1.98
SDS3YIL084C ATG5Q12380 294 aa2.69□□□□□ -1.98
SDS3YIL084C YOS1Q3E834 85 aa2.69□□□□□ -1.98
SDS3YIL084C ATG40Q99325 256 aa2.69□□□□□ -1.98
SDS3YIL084C YEL009C-AA0A023PZF2 135 aa2.68□□□□□ -1.98
SDS3YIL084C CDC28P00546 298 aaKnown RBP2.68□□□□□ -1.98
SDS3YIL084C STF2P16965 84 aa2.68□□□□□ -1.98
SDS3YIL084C YBL010CP32788 280 aa2.68□□□□□ -1.98
SDS3YIL084C ALK2P32789 676 aaPredicted RBP2.68□□□□□ -1.98
SDS3YIL084C RMR1P53060 241 aa2.68□□□□□ -1.98
SDS3YIL084C DIA1P54005 336 aa2.68□□□□□ -1.98
SDS3YIL084C BUD25P85052 153 aa2.68□□□□□ -1.98
SDS3YIL084C YHP1Q04116 353 aa2.68□□□□□ -1.98
SDS3YIL084C YMR226CQ05016 267 aaKnown RBP2.68□□□□□ -1.98
SDS3YIL084C UPS1Q05776 175 aa2.68□□□□□ -1.98
SDS3YIL084C RDS3Q06835 107 aaPredicted RBP2.68□□□□□ -1.98
SDS3YIL084C PRM3Q08931 133 aa2.68□□□□□ -1.98
SDS3YIL084C PST2Q12335 198 aaKnown RBP2.68□□□□□ -1.98
SDS3YIL084C FBA1P14540 359 aaKnown RBP2.67□□□□□ -1.98
SDS3YIL084C POF1P25576 258 aa2.67□□□□□ -1.98
SDS3YIL084C OAC1P32332 324 aa2.67□□□□□ -1.98
SDS3YIL084C RIB7P33312 244 aa2.67□□□□□ -1.98
SDS3YIL084C YKL075CP36083 450 aa2.67□□□□□ -1.98
SDS3YIL084C SRL3P36167 246 aa2.67□□□□□ -1.98
SDS3YIL084C ECM31P38122 312 aa2.67□□□□□ -1.98
SDS3YIL084C FAR7P43592 221 aa2.67□□□□□ -1.98
SDS3YIL084C RPL9BP51401 191 aaKnown RBP2.67□□□□□ -1.98
SDS3YIL084C YDR274CP87283 123 aa2.67□□□□□ -1.98
SDS3YIL084C CTR3Q06686 241 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms