RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SAR1BQ9Y6B6 198 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 XPOTO43592 962 aaKnown RBP18.72■□□□□ 0.59
PHGDH-232ENST00000641947 PQBP1O60828 265 aaKnown RBP18.72■□□□□ 0.59
PHGDH-232ENST00000641947 PAEPP09466 180 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 CD19P15391 556 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 SELPP16109 830 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 SMYD5Q6GMV2 418 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 DENND1BQ6P3S1 775 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 PHLDB2Q86SQ0 1253 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 ECHDC2Q86YB7 292 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 C1orf131Q8NDD1 294 aaKnown RBP18.72■□□□□ 0.59
PHGDH-232ENST00000641947 DIS3LQ8TF46 1054 aaKnown RBP18.72■□□□□ 0.59
PHGDH-232ENST00000641947 KBTBD7Q8WVZ9 684 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 TMEM176AQ96HP8 235 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 PSMB7Q99436 277 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 RGS18Q9NS28 235 aa18.72■□□□□ 0.59
PHGDH-232ENST00000641947 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.72■□□□□ 0.59
PHGDH-232ENST00000641947 V9GYY5 206 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-232ENST00000641947 FGFR1P11362 822 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 NSFP46459 744 aaKnown RBP18.71■□□□□ 0.59
PHGDH-232ENST00000641947 HADHBP55084 474 aaKnown RBP18.71■□□□□ 0.59
PHGDH-232ENST00000641947 LILRA4P59901 499 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 TCTN1Q2MV58 587 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 LIMS2Q7Z4I7 341 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 RHOT2Q8IXI1 618 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 HACE1Q8IYU2 909 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 COG1Q8WTW3 980 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 ZNF560Q96MR9 790 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 PAAF1Q9BRP4 392 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 C11orf70Q9BRQ4 267 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 RSAD1Q9HA92 442 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 ABCB6Q9NP58 842 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 GDAP2Q9NXN4 497 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 CTTNBP2NLQ9P2B4 639 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 CYTH4Q9UIA0 394 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 STXBP5LQ9Y2K9 1186 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 HYOU1Q9Y4L1 999 aa18.71■□□□□ 0.59
PHGDH-232ENST00000641947 KPNA7A9QM74 516 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 C9IYK1 514 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 MTA2O94776 668 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 THP07101 528 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 RRM1P23921 792 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 CXCR5P32302 372 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 CDH5P33151 784 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-232ENST00000641947 TAF6P49848 677 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 IFI16Q16666 785 aaKnown RBP18.7■□□□□ 0.58
PHGDH-232ENST00000641947 MMS22LQ6ZRQ5 1243 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 CTU1Q7Z7A3 348 aaKnown RBP18.7■□□□□ 0.58
PHGDH-232ENST00000641947 PHF13Q86YI8 300 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-232ENST00000641947 CPNE8Q86YQ8 564 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 C3orf58Q8NDZ4 430 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 RABGGTAQ92696 567 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 BTBD6Q96KE9 485 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 RPS6KC1Q96S38 1066 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 OSBPL9Q96SU4 736 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 NUP85Q9BW27 656 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 SEZ6LQ9BYH1 1024 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 TSPYL2Q9H2G4 693 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-232ENST00000641947 CNOT8Q9UFF9 292 aaKnown RBP18.7■□□□□ 0.58
PHGDH-232ENST00000641947 L1RE1Q9UN81 338 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 MICAL3Q7RTP6 2002 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 KIAA0100Q14667 2235 aaKnown RBP18.7■□□□□ 0.58
PHGDH-232ENST00000641947 TADA3O75528 432 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 DNA2P51530 1060 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 CLCNKBP51801 687 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 DAAM2Q86T65 1068 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 NT5DC3Q86UY8 548 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 CAPZA3Q96KX2 299 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 LPIN3Q9BQK8 851 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 DPEP3Q9H4B8 488 aa18.7■□□□□ 0.58
PHGDH-232ENST00000641947 PDE2AO00408 941 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-232ENST00000641947 LSM8O95777 96 aaKnown RBP18.69■□□□□ 0.58
PHGDH-232ENST00000641947 POMCP01189 267 aa18.69■□□□□ 0.58
PHGDH-232ENST00000641947 PNPLA4P41247 253 aa18.69■□□□□ 0.58
PHGDH-232ENST00000641947 FBXO46Q6PJ61 603 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-232ENST00000641947 SLC39A5Q6ZMH5 540 aa18.69■□□□□ 0.58
PHGDH-232ENST00000641947 C12orf29Q8N999 325 aa18.69■□□□□ 0.58
PHGDH-232ENST00000641947 ZNF564Q8TBZ8 553 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-232ENST00000641947 TRIM7Q9C029 511 aa18.69■□□□□ 0.58
PHGDH-232ENST00000641947 FAM124BQ9H5Z6 455 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-232ENST00000641947 EHD2Q9NZN4 543 aa18.69■□□□□ 0.58
PHGDH-232ENST00000641947 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.69■□□□□ 0.58
PHGDH-232ENST00000641947 CASTOR2A6NHX0 329 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 O00370 1275 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 MMP8P22894 467 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 TTC3P53804 2025 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 BFSP2Q13515 415 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 TUBB2AQ13885 445 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 WHAMMP3Q1A5X7 153 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 SV2CQ496J9 727 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 OSTM1Q86WC4 334 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 CREG2Q8IUH2 290 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 TUBB2BQ9BVA1 445 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 NT5C1AQ9BXI3 368 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 AVENQ9NQS1 362 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-232ENST00000641947 SLC38A7Q9NVC3 462 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 SMARCAL1Q9NZC9 954 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 ADAM22Q9P0K1 906 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 TJP2Q9UDY2 1190 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 PITPNM1O00562 1244 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms