RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 GOLGA6L10A0A0M3HER8 536 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 SMIM28A0A1B0GU29 152 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 CCDC151A5D8V7 595 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 ARVCFO00192 962 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 PGRMC1O00264 195 aaKnown RBP10.33□□□□□ -0.76
PHGDH-215ENST00000641371 PIRO00625 290 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 KCNK3O14649 394 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 ATP8B1O43520 1251 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 FTCDO95954 541 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 CHRNA1P02708 482 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 WEE2P0C1S8 567 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 COL6A1P12109 1028 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 CD19P15391 556 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 CD58P19256 250 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 CTNNA2P26232 953 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 CETN2P41208 172 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 RAD23BP54727 409 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 BFSP2Q13515 415 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 ELF2Q15723 593 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 ERCC6LQ2NKX8 1250 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 PLEKHA7Q6IQ23 1121 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 SCARA5Q6ZMJ2 495 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 ERICH1Q86X53 443 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 PALB2Q86YC2 1186 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 RASGEF1CQ8N431 466 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 TOP6BLQ8N6T0 577 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 IPO4Q8TEX9 1081 aaKnown RBP10.33□□□□□ -0.76
PHGDH-215ENST00000641371 ARHGEF26Q96DR7 871 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 CYFIP2Q96F07 1278 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 TNIP3Q96KP6 325 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 MMS19Q96T76 1030 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.33□□□□□ -0.76
PHGDH-215ENST00000641371 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.33□□□□□ -0.76
PHGDH-215ENST00000641371 CYLDQ9NQC7 956 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 IP6K2Q9UHH9 426 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 ALG6Q9Y672 507 aa10.33□□□□□ -0.76
PHGDH-215ENST00000641371 A0A0U1RQF3 1178 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 A0A1W2PQ45 241 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-215ENST00000641371 A0A1W2PQY0 241 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 INPPL1O15357 1258 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 MEFVO15553 781 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-215ENST00000641371 PSTPIP1O43586 416 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 SPOPO43791 374 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 HUS1O60921 280 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 EOMESO95936 686 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 MYCNP04198 464 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-215ENST00000641371 THP07101 528 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 PTP4A2Q12974 167 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 NFX1Q12986 1120 aaKnown RBP10.32□□□□□ -0.76
PHGDH-215ENST00000641371 ZNF268Q14587 947 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-215ENST00000641371 ACAP1Q15027 740 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 TRIM71Q2Q1W2 868 aaKnown RBP10.32□□□□□ -0.76
PHGDH-215ENST00000641371 SEL1L2Q5TEA6 688 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 ARHGAP17Q68EM7 881 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 LHX8Q68G74 356 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 WDR93Q6P2C0 686 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 DNAJC24Q6P3W2 148 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 LCLAT1Q6UWP7 414 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 ZDHHC17Q8IUH5 632 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 TMEM86AQ8N2M4 240 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 DNAJC5GQ8N7S2 189 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 SLC4A11Q8NBS3 891 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 SMG8Q8ND04 991 aaKnown RBP10.32□□□□□ -0.76
PHGDH-215ENST00000641371 C3orf20Q8ND61 904 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 APPL2Q8NEU8 664 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 SPATA4Q8NEY3 305 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 FNIP1Q8TF40 1166 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 STK32AQ8WU08 396 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 ZMAT2Q96NC0 199 aaKnown RBP10.32□□□□□ -0.76
PHGDH-215ENST00000641371 PPP1R10Q96QC0 940 aaKnown RBP10.32□□□□□ -0.76
PHGDH-215ENST00000641371 SMYD3Q9H7B4 428 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 OSGEPQ9NPF4 335 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 HESX1Q9UBX0 185 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 ANAPC7Q9UJX3 599 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 RAB21Q9UL25 225 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 PADI3Q9ULW8 664 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 POLIQ9UNA4 740 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.32□□□□□ -0.76
PHGDH-215ENST00000641371 TRIM17Q9Y577 477 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 GRIN2DO15399 1336 aa10.32□□□□□ -0.76
PHGDH-215ENST00000641371 SCN1AP35498 2009 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 KPNA7A9QM74 516 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 PROSCO94903 275 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 CTSHP09668 335 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 H2AFXP16104 143 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-215ENST00000641371 BRD2P25440 801 aaKnown RBP10.31□□□□□ -0.76
PHGDH-215ENST00000641371 CTNNA1P35221 906 aaKnown RBP10.31□□□□□ -0.76
PHGDH-215ENST00000641371 NDST1P52848 882 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 RWDD2BP57060 319 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 SLC8A3P57103 927 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 HTRA3P83110 453 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 GRIK3Q13003 919 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 PIGHQ14442 188 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-215ENST00000641371 DSC3Q14574 896 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 MESDQ14696 234 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 LRRC38Q5VT99 294 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 LIMS2Q7Z4I7 341 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 NIPA2Q8N8Q9 360 aa10.31□□□□□ -0.76
PHGDH-215ENST00000641371 EIF1ADQ8N9N8 165 aaKnown RBP10.31□□□□□ -0.76
PHGDH-215ENST00000641371 FEZF2Q8TBJ5 459 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms