RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 PHLDB3Q6NSJ2 640 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 CSGALNACT2Q8N6G5 542 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 SHDQ96IW2 340 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 ANKRD36BP1Q96IX9 119 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 R3HCC1Q9Y3T6 440 aaKnown RBP27.17■■□□□ 1.94
VEGFA-232ENST00000640653 ASB3Q9Y575 518 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 PI15O43692 258 aa27.16■■□□□ 1.94
VEGFA-232ENST00000640653 CASP1P29466 404 aa27.16■■□□□ 1.94
VEGFA-232ENST00000640653 SNRPFP62306 86 aaKnown RBP27.16■■□□□ 1.94
VEGFA-232ENST00000640653 RBP5P82980 135 aa27.16■■□□□ 1.94
VEGFA-232ENST00000640653 C2orf15Q8WU43 125 aaKnown RBP27.16■■□□□ 1.94
VEGFA-232ENST00000640653 ATOH1Q92858 354 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-232ENST00000640653 ELSPBP1Q96BH3 223 aa27.16■■□□□ 1.94
VEGFA-232ENST00000640653 SPATA32Q96LK8 384 aa27.16■■□□□ 1.94
VEGFA-232ENST00000640653 MTMR12Q9C0I1 747 aa27.16■■□□□ 1.94
VEGFA-232ENST00000640653 SCN1AP35498 2009 aa27.16■■□□□ 1.94
VEGFA-232ENST00000640653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-232ENST00000640653 KRT19P08727 400 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 SLFN14P0C7P3 912 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 TUFMP49411 452 aaKnown RBP27.15■■□□□ 1.94
VEGFA-232ENST00000640653 MRE11P49959 708 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 BFSP1Q12934 665 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 CUL4BQ13620 913 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 HS2ST1Q7LGA3 356 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 CBWD2Q8IUF1 395 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 DCP1BQ8IZD4 617 aaKnown RBP27.15■■□□□ 1.94
VEGFA-232ENST00000640653 DNAJC25Q9H1X3 360 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 ZFP14Q9HCL3 533 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 AGPAT3Q9NRZ7 376 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 SERTAD1Q9UHV2 236 aa27.15■■□□□ 1.94
VEGFA-232ENST00000640653 H0Y858 1186 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 TGFB1I1O43294 461 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 HUS1O60921 280 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 MOSPD3O75425 235 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 TNNC2P02585 160 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 FAM78AQ5JUQ0 283 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 TANGO2Q6ICL3 276 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 POTEHQ6S545 545 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 ITIH5Q86UX2 942 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 NELFCDQ8IXH7 590 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 CCDC105Q8IYK2 499 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 LEO1Q8WVC0 666 aaPredicted RBP27.14■■□□□ 1.94
VEGFA-232ENST00000640653 SCFD1Q8WVM8 642 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 ASB16Q96NS5 453 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 SEPT5Q99719 369 aaPredicted RBP27.14■■□□□ 1.94
VEGFA-232ENST00000640653 GPR88Q9GZN0 384 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 INTS13Q9NVM9 706 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 ZDHHC9Q9Y397 364 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 ATP6V1DQ9Y5K8 247 aa27.14■■□□□ 1.94
VEGFA-232ENST00000640653 CMA1P23946 247 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 TSPY1Q01534 308 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 MGAT5BQ3V5L5 792 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 TMC8Q8IU68 726 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 TMEM86AQ8N2M4 240 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 TTC9BQ8N6N2 239 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 CXorf38Q8TB03 319 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 SPPL2BQ8TCT7 592 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 SMARCD2Q92925 531 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 PSMG2Q969U7 264 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 SLC39A2Q9NP94 309 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 CGNQ9P2M7 1197 aaKnown RBP27.13■■□□□ 1.93
VEGFA-232ENST00000640653 USP25Q9UHP3 1055 aa27.13■■□□□ 1.93
VEGFA-232ENST00000640653 ACTN4O43707 911 aaKnown RBP27.12■■□□□ 1.93
VEGFA-232ENST00000640653 FGF19O95750 216 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 PFKFB1P16118 471 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 GJA1P17302 382 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 FCARP24071 287 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 STARD6P59095 220 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 PRKCQQ04759 706 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 MYO1EQ12965 1108 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 VEPH1Q14D04 833 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 TEAD2Q15562 447 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 MLF2Q15773 248 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-232ENST00000640653 SNRNP35Q16560 246 aaKnown RBP27.12■■□□□ 1.93
VEGFA-232ENST00000640653 DUOXA2Q1HG44 320 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 BMT2Q1RMZ1 405 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 SLC44A4Q53GD3 710 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 LMBRD2Q68DH5 695 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-232ENST00000640653 DNAJB7Q7Z6W7 309 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-232ENST00000640653 WDR49Q8IV35 697 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 GRAMD1CQ8IYS0 662 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 PDCL2Q8N4E4 241 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 DTWD2Q8NBA8 298 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 SHKBP1Q8TBC3 707 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 FAM200AQ8TCP9 573 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 FAM84AQ96KN4 292 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 LRRC3Q9BY71 257 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 PLA2G2FQ9BZM2 168 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 SLITRK6Q9H5Y7 841 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 FAM86C1Q9NVL1 165 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 GDAP2Q9NXN4 497 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 SIX4Q9UIU6 781 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 L1RE1Q9UN81 338 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 SIT1Q9Y3P8 196 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 TCHHQ07283 1943 aa27.12■■□□□ 1.93
VEGFA-232ENST00000640653 A0A1B0GVL5 298 aa27.11■■□□□ 1.93
VEGFA-232ENST00000640653 NRG2O14511 850 aaPredicted RBP27.11■■□□□ 1.93
VEGFA-232ENST00000640653 SOAT2O75908 522 aa27.11■■□□□ 1.93
VEGFA-232ENST00000640653 CYP2J2P51589 502 aa27.11■■□□□ 1.93
VEGFA-232ENST00000640653 SNW1Q13573 536 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms