RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 ASAH2Q9NR71 780 aa14.97□□□□□ -0.01
HLA-C-210ENST00000640219 GTSE1Q9NYZ3 720 aa14.97□□□□□ -0.01
HLA-C-210ENST00000640219 CEP72Q9P209 647 aa14.97□□□□□ -0.01
HLA-C-210ENST00000640219 MTMR6Q9Y217 621 aa14.97□□□□□ -0.01
HLA-C-210ENST00000640219 CLIC4Q9Y696 253 aa14.97□□□□□ -0.01
HLA-C-210ENST00000640219 ITPR1Q14643 2758 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 BCLAF3A2AJT9 711 aaKnown RBP14.96□□□□□ -0.01
HLA-C-210ENST00000640219 ARHGEF35A5YM69 484 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 HYAL3O43820 417 aaPredicted RBP14.96□□□□□ -0.01
HLA-C-210ENST00000640219 RHOBTB1O94844 696 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 PRKCBP05771 671 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 LIG1P18858 919 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 EPHA5P54756 1037 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 KRT85P78386 507 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 RAD51AP2Q09MP3 1159 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 TWF1Q12792 350 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 SF3A1Q15459 793 aaKnown RBP14.96□□□□□ -0.01
HLA-C-210ENST00000640219 HAUS3Q68CZ6 603 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 HAUS6Q7Z4H7 955 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 GPIHBP1Q8IV16 184 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 PDLIM2Q96JY6 352 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 NACC1Q96RE7 527 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 RUSC1Q9BVN2 902 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 TMEM9BQ9NQ34 198 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 MSRB2Q9Y3D2 182 aa14.96□□□□□ -0.01
HLA-C-210ENST00000640219 LRRIQ4A6NIV6 560 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 N4BP3O15049 544 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 ATG13O75143 517 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 GADD45BO75293 160 aaPredicted RBP14.95□□□□□ -0.02
HLA-C-210ENST00000640219 PTMAP06454 111 aaKnown RBP14.95□□□□□ -0.02
HLA-C-210ENST00000640219 MARCKSP29966 332 aaPredicted RBP14.95□□□□□ -0.02
HLA-C-210ENST00000640219 CACNB1Q02641 598 aaPredicted RBP14.95□□□□□ -0.02
HLA-C-210ENST00000640219 UPP1Q16831 310 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 TMEM132AQ24JP5 1023 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 TPGS2Q68CL5 300 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 C3orf58Q8NDZ4 430 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 DEFB124Q8NES8 71 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 SHKBP1Q8TBC3 707 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 ZFYVE19Q96K21 471 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 PRIMPOLQ96LW4 560 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 UROC1Q96N76 676 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 PDZD7Q9H5P4 517 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 GDPD2Q9HCC8 539 aa14.95□□□□□ -0.02
HLA-C-210ENST00000640219 PRMT7Q9NVM4 692 aaPredicted RBP14.95□□□□□ -0.02
HLA-C-210ENST00000640219 TRIP11Q15643 1979 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 NPHP3-ACAD11A0A0J9YXS1 232 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 GOLGA6L4A6NEF3 574 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 KHNYNO15037 678 aaKnown RBP14.94□□□□□ -0.02
HLA-C-210ENST00000640219 PRPHP41219 470 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 ARHGAP29Q52LW3 1261 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 GLRA4Q5JXX5 417 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 KRT79Q5XKE5 535 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 C19orf48Q6RUI8 117 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 USP49Q70CQ1 688 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 ARID3BQ8IVW6 561 aaPredicted RBP14.94□□□□□ -0.02
HLA-C-210ENST00000640219 CAMKK1Q8N5S9 505 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 TMEM209Q96SK2 561 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 SCAND2PQ9GZW5 306 aaPredicted RBP14.94□□□□□ -0.02
HLA-C-210ENST00000640219 GOLGA2P5Q9HBQ8 144 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 KLK13Q9UKR3 277 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 GDAQ9Y2T3 454 aa14.94□□□□□ -0.02
HLA-C-210ENST00000640219 FLNBO75369 2602 aaKnown RBP14.94□□□□□ -0.02
HLA-C-210ENST00000640219 A0A1W2PRU2 124 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 H7C4K7 107 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 DPYSL4O14531 572 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 CDX4O14627 284 aaPredicted RBP14.93□□□□□ -0.02
HLA-C-210ENST00000640219 DCLK1O15075 740 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 PDIA5Q14554 519 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 KARSQ15046 597 aaKnown RBP14.93□□□□□ -0.02
HLA-C-210ENST00000640219 PTPAQ15257 358 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 UAP1L1Q3KQV9 507 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 BRAPQ7Z569 592 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 PDZD3Q86UT5 571 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 CLIC6Q96NY7 704 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 LRRC3BQ96PB8 259 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 PPP1R10Q96QC0 940 aaKnown RBP14.93□□□□□ -0.02
HLA-C-210ENST00000640219 ADPGKQ9BRR6 497 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 FZD8Q9H461 694 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 FBXL5Q9UKA1 691 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 GPSM3Q9Y4H4 160 aa14.93□□□□□ -0.02
HLA-C-210ENST00000640219 ADAMTS20P59510 1910 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 SFI1A8K8P3 1242 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 LAD1O00515 517 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 HIP1RO75146 1068 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 CYP11B2P19099 503 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 TNK2Q07912 1038 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 GRSF1Q12849 480 aaKnown RBP eCLIP14.92□□□□□ -0.02
HLA-C-210ENST00000640219 DHX8Q14562 1220 aaKnown RBP14.92□□□□□ -0.02
HLA-C-210ENST00000640219 FAM187BQ17R55 369 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 CTXN3Q4LDR2 81 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 PROSER1Q86XN7 944 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 ZBTB8OSQ8IWT0 167 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 DAW1Q8N136 415 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 HHIPQ96QV1 700 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 USP28Q96RU2 1077 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 POLR3BQ9NW08 1133 aaPredicted RBP14.92□□□□□ -0.02
HLA-C-210ENST00000640219 ANKFY1Q9P2R3 1169 aa14.92□□□□□ -0.02
HLA-C-210ENST00000640219 AFF4Q9UHB7 1163 aaKnown RBP14.92□□□□□ -0.02
HLA-C-210ENST00000640219 MAFFQ9ULX9 164 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms