RNA–Protein interactions for RNA: ENST00000638589.1

HNRNPU-215, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 2

Gene HNRNPU, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-215	ENST00000638589	TSC22D4	Q9Y3Q8	395 aa		4.25	□□□□□ -1.73
HNRNPU-215	ENST00000638589	NAIP	Q13075	1403 aa		4.25	□□□□□ -1.73
HNRNPU-215	ENST00000638589	KIAA1107	Q9UPP5	1409 aa		4.25	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CCDC141	Q6ZP82	1450 aa		4.25	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CENPVL1	A0A0U1RR11	272 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CFAP69	A5D8W1	941 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589		B5MCH6	92 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589		F8W8V4	182 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	NARS	O43776	548 aa	Known RBP	4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	B3GALT2	O43825	422 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	EIF3J	O75822	258 aa	Known RBP	4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	SPDEF	O95238	335 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	GJB1	P08034	283 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	HK3	P52790	923 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CTXN1	P60606	82 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	FAM90A1	Q86YD7	464 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	SLC44A3	Q8N4M1	653 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	GPR150	Q8NGU9	434 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ZNF503	Q96F45	646 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ZNF747	Q9BV97	191 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	NMRK2	Q9NPI5	230 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	AKIP1	Q9NQ31	210 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	FBXO9	Q9UK97	447 aa	Predicted RBP	4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	SETD5	Q9C0A6	1442 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ZFYVE16	Q7Z3T8	1539 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	RICTOR	Q6R327	1708 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	UNC13B	O14795	1591 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	KDM5C	P41229	1560 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ARHGEF12	Q9NZN5	1544 aa		4.24	□□□□□ -1.73
HNRNPU-215	ENST00000638589	RAB3GAP2	Q9H2M9	1393 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	PRC1	O43663	620 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	FSHB	P01225	129 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	IL2RB	P14784	551 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	NPR1	P16066	1061 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ACRV1	P26436	265 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CYP2C19	P33261	490 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	SOX8	P57073	446 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	REST	Q13127	1097 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	MYBPC2	Q14324	1141 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	GLIPR1L2	Q4G1C9	344 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	C3orf38	Q5JPI3	329 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	DACT2	Q5SW24	774 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	VPS53	Q5VIR6	699 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	AGAP9	Q5VTM2	703 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	RINL	Q6ZS11	566 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CCDC149	Q6ZUS6	474 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	TMPRSS6	Q8IU80	811 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CPEB3	Q8NE35	698 aa	Known RBP	4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CACTIN	Q8WUQ7	758 aa	Known RBP	4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	GPR20	Q99678	358 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	C1QTNF3	Q9BXJ4	246 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	C22orf23	Q9BZE7	217 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	NRDE2	Q9H7Z3	1164 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	OBP2A	Q9NY56	170 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	POLH	Q9Y253	713 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	BCORL1	Q5H9F3	1711 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	KDM5D	Q9BY66	1539 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589		A0A1B0GTW7	788 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	FAM171A2	A8MVW0	826 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	APAF1	O14727	1248 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	DNAJB5	O75953	348 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	VNN1	O95497	513 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	LDHA	P00338	332 aa	Known RBP	4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	POMC	P01189	267 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ADRB1	P08588	477 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	SNRPA1	P09661	255 aa	Known RBP	4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	KRT4	P19013	534 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	YY1	P25490	414 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ITGA8	P53708	1063 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	KRT85	P78386	507 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	NKX6-1	P78426	367 aa	Predicted RBP	4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	SP140	Q13342	867 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	DHX8	Q14562	1220 aa	Known RBP	4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	GEN1	Q17RS7	908 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	KLHDC7A	Q5VTJ3	777 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	OTUD7B	Q6GQQ9	843 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	KCTD20	Q7Z5Y7	419 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	TTC7B	Q86TV6	843 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	DENND1C	Q8IV53	801 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	TCEAL8	Q8IYN2	117 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	MAML1	Q92585	1016 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	TMEM125	Q96AQ2	219 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	RUNDC1	Q96C34	613 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ARPC5L	Q9BPX5	153 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	DEPDC5	O75140	1603 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	FANCA	O15360	1455 aa		4.23	□□□□□ -1.73
HNRNPU-215	ENST00000638589	C9orf84	Q5VXU9	1444 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	RFPL1	O75677	317 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	C6	P13671	934 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	TYR	P14679	529 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	WAS	P42768	502 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ZNF134	P52741	427 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	EIF2B5	Q13144	721 aa	Known RBP	4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	LSM12	Q3MHD2	195 aa	Known RBP	4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	C10orf62	Q5T681	223 aa	Predicted RBP	4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	DOK3	Q7L591	496 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	LIX1L	Q8IVB5	337 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.22	□□□□□ -1.73

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