RNA–Protein interactions for RNA: ENST00000637110.1

CLN3-257, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 565 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-257ENST00000637110 LILRA4P59901 499 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 ADCY1Q08828 1119 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 MRPL58Q14197 206 aaKnown RBP12.56□□□□□ -0.4
CLN3-257ENST00000637110 OVOS1Q6IE37 1185 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 CRELD2Q6UXH1 353 aaPredicted RBP12.56□□□□□ -0.4
CLN3-257ENST00000637110 UNC13DQ70J99 1090 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 GRAMD1CQ8IYS0 662 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 GPD1LQ8N335 351 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 ELMOD1Q8N336 334 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 ZBTB44Q8NCP5 570 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 GLIS3Q8NEA6 775 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 ST13P5Q8NFI4 369 aaPredicted RBP12.56□□□□□ -0.4
CLN3-257ENST00000637110 LEO1Q8WVC0 666 aaPredicted RBP12.56□□□□□ -0.4
CLN3-257ENST00000637110 DDX1Q92499 740 aaKnown RBP12.56□□□□□ -0.4
CLN3-257ENST00000637110 SENP8Q96LD8 212 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 PGLYRP2Q96PD5 576 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 MYADMQ96S97 322 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 OSBPL6Q9BZF3 934 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 ANGPTL2Q9UKU9 493 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 ZDHHC9Q9Y397 364 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 C2CD2Q9Y426 696 aa12.56□□□□□ -0.4
CLN3-257ENST00000637110 OR6C75A6NL08 312 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 PIRO00625 290 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 ABLIM3O94929 683 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 KRT19P08727 400 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 OR4Q2P0C623 313 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 LAMP2P13473 410 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 ATF2P15336 505 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 PFKFB1P16118 471 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 PTPN2P17706 415 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 PAX3P23760 479 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 TAF6P49848 677 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
CLN3-257ENST00000637110 CUL4BQ13620 913 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 PABPC1LQ4VXU2 614 aaKnown RBP12.55□□□□□ -0.4
CLN3-257ENST00000637110 TPGS2Q68CL5 300 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 RTL10Q7L3V2 364 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 NT5DC4Q86YG4 428 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 BRSK2Q8IWQ3 736 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 EFCAB13Q8IY85 973 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 THEM5Q8N1Q8 247 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 ZSWIM2Q8NEG5 633 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 ZNF560Q96MR9 790 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 OXCT2Q9BYC2 517 aaPredicted RBP12.55□□□□□ -0.4
CLN3-257ENST00000637110 FAM126AQ9BYI3 521 aaPredicted RBP12.55□□□□□ -0.4
CLN3-257ENST00000637110 SLC39A2Q9NP94 309 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 HCFC1R1Q9NWW0 138 aa12.55□□□□□ -0.4
CLN3-257ENST00000637110 AFF4Q9UHB7 1163 aaKnown RBP12.55□□□□□ -0.4
CLN3-257ENST00000637110 MRPS23Q9Y3D9 190 aaKnown RBP12.55□□□□□ -0.4
CLN3-257ENST00000637110 PVALEFA0A1B0GWK0 134 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 ZNF233A6NK53 670 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 ANHXE9PGG2 379 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 CYB561D2O14569 222 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 KIAA0391O15091 583 aaKnown RBP12.54□□□□□ -0.4
CLN3-257ENST00000637110 CLIC2O15247 247 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 EIF3DO15371 548 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLN3-257ENST00000637110 LILRB5O75023 590 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 LRP3O75074 770 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 OAZ2O95190 189 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 SEC24AO95486 1093 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 TMEM191BP0C7N4 346 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 SLFN14P0C7P3 912 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 TYMPP19971 482 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 CMA1P23946 247 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 SYKP43405 635 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLN3-257ENST00000637110 PRKCQQ04759 706 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 TWF1Q12792 350 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 HTR4Q13639 388 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 UBXN2BQ14CS0 331 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 SV2CQ496J9 727 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 IQCEQ6IPM2 695 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 HS2ST1Q7LGA3 356 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 TCEAL8Q8IYN2 117 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 CSGALNACT2Q8N6G5 542 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 RDH13Q8NBN7 331 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 ZNF507Q8TCN5 953 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 ING5Q8WYH8 240 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 PAGE5Q96GU1 130 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 ZNF512Q96ME7 567 aaPredicted RBP12.54□□□□□ -0.4
CLN3-257ENST00000637110 CORO1BQ9BR76 489 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 SCAND2PQ9GZW5 306 aaPredicted RBP12.54□□□□□ -0.4
CLN3-257ENST00000637110 PDE11AQ9HCR9 933 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 EXOC1Q9NV70 894 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 HSPBP1Q9NZL4 362 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 DNMT3BQ9UBC3 853 aaKnown RBP12.54□□□□□ -0.4
CLN3-257ENST00000637110 RALYQ9UKM9 306 aaKnown RBP12.54□□□□□ -0.4
CLN3-257ENST00000637110 DSEQ9UL01 958 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 CDH7Q9ULB5 785 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 AGAP1Q9UPQ3 857 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 INSL5Q9Y5Q6 135 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 ZFP37Q9Y6Q3 630 aaPredicted RBP12.54□□□□□ -0.4
CLN3-257ENST00000637110 NUMBLQ9Y6R0 609 aa12.54□□□□□ -0.4
CLN3-257ENST00000637110 ANO9A1A5B4 782 aa12.53□□□□□ -0.4
CLN3-257ENST00000637110 NCAM2O15394 837 aa12.53□□□□□ -0.4
CLN3-257ENST00000637110 LRRN2O75325 713 aa12.53□□□□□ -0.4
CLN3-257ENST00000637110 TNNC2P02585 160 aa12.53□□□□□ -0.4
CLN3-257ENST00000637110 ITGB3P05106 788 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms