RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 GAS2L1Q99501 681 aaPredicted RBP17.14■□□□□ 0.33
CLN6-216ENST00000636876 BCO2Q9BYV7 579 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 RBSNQ9H1K0 784 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 RXFP1Q9HBX9 757 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.14■□□□□ 0.33
CLN6-216ENST00000636876 MTRRQ9UBK8 725 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 BACE2Q9Y5Z0 518 aa17.14■□□□□ 0.33
CLN6-216ENST00000636876 HIDE1A8MVS5 230 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 TBC1D4O60343 1298 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 TACC1O75410 805 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 SERPINC1P01008 464 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 SLC9A1P19634 815 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 WARSP23381 471 aaKnown RBP17.13■□□□□ 0.33
CLN6-216ENST00000636876 PON1P27169 355 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 CA8P35219 290 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 LRMPQ12912 555 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 FILIP1LQ4L180 1135 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 ZNF280DQ6N043 979 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 TRIM65Q6PJ69 517 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.13■□□□□ 0.33
CLN6-216ENST00000636876 COL25A1Q9BXS0 654 aaPredicted RBP17.13■□□□□ 0.33
CLN6-216ENST00000636876 SDCBP2Q9H190 292 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 CYP3A43Q9HB55 503 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
CLN6-216ENST00000636876 FNIP2Q9P278 1114 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 MTCH2Q9Y6C9 303 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 TTC28Q96AY4 2481 aa17.13■□□□□ 0.33
CLN6-216ENST00000636876 A0A1B0GTH6 734 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 GABRDO14764 452 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 CNPP09543 421 aaKnown RBP17.12■□□□□ 0.33
CLN6-216ENST00000636876 RPL17P18621 184 aaKnown RBP17.12■□□□□ 0.33
CLN6-216ENST00000636876 RAP1GAPP47736 663 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 CDH8P55286 799 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 UBXN1Q04323 297 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 CTXN3Q4LDR2 81 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 OSTM1Q86WC4 334 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 ARHGEF19Q8IW93 802 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 MYLIPQ8WY64 445 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 NAP1L5Q96NT1 182 aaPredicted RBP17.12■□□□□ 0.33
CLN6-216ENST00000636876 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
CLN6-216ENST00000636876 RTP3Q9BQQ7 232 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 MRPL45Q9BRJ2 306 aaKnown RBP17.12■□□□□ 0.33
CLN6-216ENST00000636876 EMILIN2Q9BXX0 1053 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 OXCT2Q9BYC2 517 aaPredicted RBP17.12■□□□□ 0.33
CLN6-216ENST00000636876 FBXL5Q9UKA1 691 aa17.12■□□□□ 0.33
CLN6-216ENST00000636876 REV3LO60673 3130 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 OR6C75A6NL08 312 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 TEX28O15482 410 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 WEE2P0C1S8 567 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 IGFBP4P22692 258 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 TBXAS1P24557 533 aaPredicted RBP17.11■□□□□ 0.33
CLN6-216ENST00000636876 LHX1P48742 406 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 KCNMA1Q12791 1236 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 CUL2Q13617 745 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 RSPO2Q6UXX9 243 aaPredicted RBP17.11■□□□□ 0.33
CLN6-216ENST00000636876 ADGRD2Q7Z7M1 963 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 THEM5Q8N1Q8 247 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 PPM1KQ8N3J5 372 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 KLHL5Q96PQ7 755 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 ERGIC2Q96RQ1 377 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 ARID3AQ99856 593 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 CLSTN3Q9BQT9 956 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 SNX25Q9H3E2 840 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 NSUN3Q9H649 340 aaKnown RBP17.11■□□□□ 0.33
CLN6-216ENST00000636876 SIX2Q9NPC8 291 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 DDX43Q9NXZ2 648 aaKnown RBP17.11■□□□□ 0.33
CLN6-216ENST00000636876 SIK3Q9Y2K2 1263 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 VCANP13611 3396 aa17.11■□□□□ 0.33
CLN6-216ENST00000636876 ADAM12O43184 909 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 TEX33O43247 280 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 ADH1AP07327 375 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 PCSK1P29120 753 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 GNL1P36915 607 aaPredicted RBP17.1■□□□□ 0.33
CLN6-216ENST00000636876 NDUFV1P49821 464 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 UBASH3AP57075 661 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 APBA1Q02410 837 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 GCNT1Q02742 428 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 SYCP1Q15431 976 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 SLC8B1Q6J4K2 584 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 PHLDB3Q6NSJ2 640 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 DPY19L2P1Q6NXN4 242 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 OR6B3Q8NGW1 331 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 OR10T2Q8NGX3 314 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 PPP2R3CQ969Q6 453 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 LSM14BQ9BX40 385 aaKnown RBP17.1■□□□□ 0.33
CLN6-216ENST00000636876 FAM124BQ9H5Z6 455 aaPredicted RBP17.1■□□□□ 0.33
CLN6-216ENST00000636876 TLE6Q9H808 572 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 APEX2Q9UBZ4 518 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 CDY1Q9Y6F8 540 aa17.1■□□□□ 0.33
CLN6-216ENST00000636876 HCRTO43612 131 aa17.09■□□□□ 0.33
CLN6-216ENST00000636876 CD58P19256 250 aa17.09■□□□□ 0.33
CLN6-216ENST00000636876 OR1D2P34982 312 aa17.09■□□□□ 0.33
CLN6-216ENST00000636876 YWHAEP62258 255 aaKnown RBP17.09■□□□□ 0.33
CLN6-216ENST00000636876 INCA1Q0VD86 236 aa17.09■□□□□ 0.33
CLN6-216ENST00000636876 NR1I3Q14994 352 aa17.09■□□□□ 0.33
CLN6-216ENST00000636876 DUSP6Q16828 381 aa17.09■□□□□ 0.33
CLN6-216ENST00000636876 TCEAL5Q5H9L2 206 aa17.09■□□□□ 0.33
CLN6-216ENST00000636876 RRAGAQ7L523 313 aa17.09■□□□□ 0.33
CLN6-216ENST00000636876 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
CLN6-216ENST00000636876 TTC39CQ8N584 583 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms