RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 CPLX3Q8WVH0 158 aa16.62■□□□□ 0.25
CTSD-207ENST00000636571 PDLIM2Q96JY6 352 aa16.62■□□□□ 0.25
CTSD-207ENST00000636571 TMEM209Q96SK2 561 aa16.62■□□□□ 0.25
CTSD-207ENST00000636571 RTP3Q9BQQ7 232 aa16.62■□□□□ 0.25
CTSD-207ENST00000636571 AJAP1Q9UKB5 411 aaPredicted RBP16.62■□□□□ 0.25
CTSD-207ENST00000636571 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.61■□□□□ 0.25
CTSD-207ENST00000636571 CARNS1A5YM72 827 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 P4HA2O15460 535 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 HUS1O60921 280 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 LILRB3O75022 631 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 CXCL14O95715 111 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 URODP06132 367 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 ODC1P11926 461 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 UBE3AQ05086 875 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 ELAVL2Q12926 359 aaKnown RBP16.61■□□□□ 0.25
CTSD-207ENST00000636571 EXOC3L4Q17RC7 722 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 SPECC1LQ69YQ0 1117 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 DPY19L2P1Q6NXN4 242 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 GBP6Q6ZN66 633 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 RRAGAQ7L523 313 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 ADGRF2Q8IZF7 708 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 DEFB123Q8N688 67 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 LSM14BQ9BX40 385 aaKnown RBP16.61■□□□□ 0.25
CTSD-207ENST00000636571 IMPG2Q9BZV3 1241 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 SIX2Q9NPC8 291 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 HMGXB4Q9UGU5 601 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 COL6A3P12111 3177 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 C2orf71A6NGG8 1288 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 SYN3O14994 580 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 PER2O15055 1255 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 OR4Q2P0C623 313 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 ACAT1P24752 427 aaKnown RBP16.61■□□□□ 0.25
CTSD-207ENST00000636571 LMO2P25791 158 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 PLXNA3P51805 1871 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 ORC1Q13415 861 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 WDR44Q5JSH3 913 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 LIMS2Q7Z4I7 341 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 RBM23Q86U06 439 aaKnown RBP16.61■□□□□ 0.25
CTSD-207ENST00000636571 APPL2Q8NEU8 664 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 OR10T2Q8NGX3 314 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 MYLIPQ8WY64 445 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 GUCD1Q96NT3 240 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 NIF3L1Q9GZT8 377 aa16.61■□□□□ 0.25
CTSD-207ENST00000636571 FAM207AQ9NSI2 230 aaPredicted RBP16.61■□□□□ 0.25
CTSD-207ENST00000636571 GTPBP10A4D1E9 387 aaKnown RBP16.6■□□□□ 0.25
CTSD-207ENST00000636571 EPHB6O15197 1021 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 CYP11A1P05108 521 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 PTMAP06454 111 aaKnown RBP16.6■□□□□ 0.25
CTSD-207ENST00000636571 CD58P19256 250 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 GTF2F1P35269 517 aaKnown RBP eCLIP16.6■□□□□ 0.255e-6■■■■□ 24.4
CTSD-207ENST00000636571 YWHAHQ04917 246 aaPredicted RBP16.6■□□□□ 0.25
CTSD-207ENST00000636571 CETN1Q12798 172 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 MRPL58Q14197 206 aaKnown RBP16.6■□□□□ 0.25
CTSD-207ENST00000636571 PSMD5Q16401 504 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 OVOS1Q6IE37 1185 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 TOP6BLQ8N6T0 577 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 MRPL43Q8N983 215 aaKnown RBP16.6■□□□□ 0.25
CTSD-207ENST00000636571 PIK3R5Q8WYR1 880 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 TAF4BQ92750 862 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 ERGIC2Q96RQ1 377 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 PPP1R9BQ96SB3 815 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 LPIN3Q9BQK8 851 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 BCO2Q9BYV7 579 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 MRPL17Q9NRX2 175 aaKnown RBP16.6■□□□□ 0.25
CTSD-207ENST00000636571 SIK3Q9Y2K2 1263 aa16.6■□□□□ 0.25
CTSD-207ENST00000636571 A0A1W2PQC6 194 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 CNPP09543 421 aaKnown RBP16.59■□□□□ 0.25
CTSD-207ENST00000636571 PDGFRBP09619 1106 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 IGFBP4P22692 258 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 SMC1AQ14683 1233 aaKnown RBP16.59■□□□□ 0.25
CTSD-207ENST00000636571 ARID5BQ14865 1188 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 PPM1KQ8N3J5 372 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 CCDC150Q8NCX0 1101 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 MRPL38Q96DV4 380 aaKnown RBP16.59■□□□□ 0.25
CTSD-207ENST00000636571 KREMEN1Q96MU8 473 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 NT5C1BQ96P26 610 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 CDX2Q99626 313 aaPredicted RBP16.59■□□□□ 0.25
CTSD-207ENST00000636571 CLSTN3Q9BQT9 956 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 DPEP3Q9H4B8 488 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 FBXL5Q9UKA1 691 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 TEX28O15482 410 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 ATP2C2O75185 946 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 OAZ2O95190 189 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 TYMPP19971 482 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 ARPP19P56211 112 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 RBM10P98175 930 aaKnown RBP16.59■□□□□ 0.25
CTSD-207ENST00000636571 CTXN3Q4LDR2 81 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 CCDC186Q7Z3E2 898 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 OR6B3Q8NGW1 331 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 TWNKQ96RR1 684 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 DDX43Q9NXZ2 648 aaKnown RBP16.59■□□□□ 0.25
CTSD-207ENST00000636571 MTRRQ9UBK8 725 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 MTCH2Q9Y6C9 303 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 CDY1Q9Y6F8 540 aa16.59■□□□□ 0.25
CTSD-207ENST00000636571 RNF225M0QZC1 329 aaPredicted RBP16.58■□□□□ 0.24
CTSD-207ENST00000636571 GABRDO14764 452 aa16.58■□□□□ 0.24
CTSD-207ENST00000636571 TBC1D4O60343 1298 aa16.58■□□□□ 0.24
CTSD-207ENST00000636571 PSMC1P62191 440 aaKnown RBP16.58■□□□□ 0.24
CTSD-207ENST00000636571 CUL2Q13617 745 aa16.58■□□□□ 0.24
CTSD-207ENST00000636571 ZNF394Q53GI3 561 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms