RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 CIAO1O76071 339 aa10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 KRT7P08729 469 aa10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 ZNF157P51786 506 aaPredicted RBP10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 LRRC6Q86X45 466 aa10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 CCNYL1Q8N7R7 359 aa10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 DGCR14Q96DF8 476 aaKnown RBP10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 CMTM5Q96DZ9 223 aa10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 SPATA16Q9BXB7 569 aa10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 OSBPL7Q9BZF2 842 aa10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 TRIM33Q9UPN9 1127 aa10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 DMTF1Q9Y222 760 aa10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 SHROOM2Q13796 1616 aa10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 CFAP65Q6ZU64 1925 aaKnown RBP10.29□□□□□ -0.76
SPTAN1-228ENST00000635853 SFI1A8K8P3 1242 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 LCP1P13796 627 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PRELPP51888 382 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 KRT17Q04695 432 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ZNF211Q13398 564 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 MORF4L2Q15014 288 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 CNPY1Q3B7I2 92 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ARHGAP15Q53QZ3 475 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 TMEM139Q8IV31 216 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 L3MBTL3Q96JM7 780 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ZNF570Q96NI8 536 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 CYP4F11Q9HBI6 524 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 CYP26B1Q9NR63 512 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 CACNA2D2Q9NY47 1150 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 POTEFA5A3E0 1075 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 KCNQ3O43525 872 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 KLHL2O95198 593 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 GSNP06396 782 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PLCG1P19174 1290 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 SDC4P31431 198 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ARHGEF7Q14155 803 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ZNF268Q14587 947 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 TRIM60Q495X7 471 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 MDH1BQ5I0G3 518 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 SYNE4Q8N205 404 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 RFWD2Q8NHY2 731 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 CELF4Q9BZC1 486 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PAIP1Q9H074 479 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 STN1Q9H668 368 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 RUBCNLQ9H714 662 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ZFYVE28Q9HCC9 887 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PKD2L2Q9NZM6 624 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 SRP68Q9UHB9 627 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 DUSP10Q9Y6W6 482 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PENKP01210 267 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 CALB1P05937 261 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 CDK8P49336 464 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 HAUS6Q7Z4H7 955 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ADCK1Q86TW2 530 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 NSUN6Q8TEA1 469 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ZNF668Q96K58 619 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 MUC3BQ9H195 1237 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 MANSC1Q9H8J5 431 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 KIAA1586Q9HCI6 787 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 METTL5Q9NRN9 209 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PXDNLA1KZ92 1463 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ASB14A6NK59 587 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 CFAP99D6REC4 459 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ALDH1A2O94788 518 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 TRIM16O95361 564 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 HIST1H2AGP0C0S8 130 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 HIST1H2ADP20671 130 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ST3GAL1Q11201 340 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 CDCA2Q69YH5 1023 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PI16Q6UXB8 463 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 HIST1H2AHQ96KK5 128 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 HIST1H2AJQ99878 128 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 FAM213AQ9BRX8 229 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 H2AFJQ9BTM1 129 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PUS3Q9BZE2 481 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 FAM217BQ9NTX9 383 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 SLC12A4Q9UP95 1085 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 DNAJC3Q13217 504 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 TFDP2Q14188 446 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 TRAF7Q6Q0C0 670 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 NCCRP1Q6ZVX7 275 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PRPF39Q86UA1 669 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 MCPH1Q8NEM0 835 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 GDPD5Q8WTR4 605 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 RFFLQ8WZ73 363 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PTPRN2Q92932 1015 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 VPS50Q96JG6 964 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ZNF560Q96MR9 790 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 ECSITQ9BQ95 431 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PCDHA6Q9UN73 950 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 PCDHA8Q9Y5H6 950 aa10.28□□□□□ -0.76
SPTAN1-228ENST00000635853 RBM47A0AV96 593 aaKnown RBP10.27□□□□□ -0.76
SPTAN1-228ENST00000635853 PSMC3P17980 439 aa10.27□□□□□ -0.76
SPTAN1-228ENST00000635853 SLC9A1P19634 815 aa10.27□□□□□ -0.76
SPTAN1-228ENST00000635853 CDC27P30260 824 aa10.27□□□□□ -0.76
SPTAN1-228ENST00000635853 COPB2P35606 906 aa10.27□□□□□ -0.76
SPTAN1-228ENST00000635853 RPL5P46777 297 aaKnown RBP10.27□□□□□ -0.76
SPTAN1-228ENST00000635853 HEATR6Q6AI08 1181 aaKnown RBP10.27□□□□□ -0.76
SPTAN1-228ENST00000635853 C16orf89Q6UX73 402 aa10.27□□□□□ -0.76
SPTAN1-228ENST00000635853 RBM44Q6ZP01 1051 aaKnown RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms