RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 NSUN7Q8NE18 718 aaKnown RBP1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 GPR156Q8NFN8 814 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 PRSS3P2Q8NHM4 247 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 WDR66Q8TBY9 1149 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 TGFBRAP1Q8WUH2 860 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 NUP133Q8WUM0 1156 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 SLC5A5Q92911 643 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 PAWRQ96IZ0 340 aaKnown RBP1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 MARK4Q96L34 752 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 C5orf34Q96MH7 638 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 WNT8AQ9H1J5 351 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 SPC25Q9HBM1 224 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 EMC7Q9NPA0 242 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 PDGFCQ9NRA1 345 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 TMEM140Q9NV12 185 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 MCM8Q9UJA3 840 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 ZBTB21Q9ULJ3 1066 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 MAPRE3Q9UPY8 281 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 PRKAB1Q9Y478 270 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 HECW2Q9P2P5 1572 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 FGD5Q6ZNL6 1462 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 CEP152O94986 1710 aa1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 POLR1AO95602 1720 aaPredicted RBP1.49□□□□□ -2.17
SMARCB1-209ENST00000635578 CFAP65Q6ZU64 1925 aaKnown RBP1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 SBNO2Q9Y2G9 1366 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 MAP3K4Q9Y6R4 1608 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 WASHC2AQ641Q2 1341 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 ADGRA2Q96PE1 1338 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 A0A087X0B3 334 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 ANKRD62A6NC57 917 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 PRRT4C9JH25 899 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 SOCS2O14508 198 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 NEMP1O14524 444 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 BRINP1O60477 761 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 DNAJB5O75953 348 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 ALPLP05186 524 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 KCNA2P16389 499 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 CCND1P24385 295 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 GUCY1A2P33402 732 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 LSSP48449 732 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 EVA1CP58658 441 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 PHC1P78364 1004 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 CREMQ03060 361 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 ITKQ08881 620 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 FHL3Q13643 280 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 ACAP2Q15057 778 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 UGT8Q16880 541 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 ZNF628Q5EBL2 1059 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 EGFLAMQ63HQ2 1017 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 OTUD7BQ6GQQ9 843 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 SHC4Q6S5L8 630 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 SEM1Q6ZVN7 128 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 SLC29A4Q7RTT9 530 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 RNF180Q86T96 592 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 KRT73Q86Y46 540 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 AMOTL1Q8IY63 956 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 PNLDC1Q8NA58 520 aaKnown RBP1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 FANCBQ8NB91 859 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 SMC1BQ8NDV3 1235 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 CCHCR1Q8TD31 782 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 SSH1Q8WYL5 1049 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 SNX19Q92543 992 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 FKBP10Q96AY3 582 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 AHCYL2Q96HN2 611 aaKnown RBP1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 SMAD5Q99717 465 aaKnown RBP1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 QRSL1Q9H0R6 528 aaKnown RBP1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 KLC4Q9NSK0 619 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 TXLNGQ9NUQ3 528 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 VSX1Q9NZR4 365 aaPredicted RBP1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 DKK3Q9UBP4 350 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 APOBEC2Q9Y235 224 aaKnown RBP1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 ABCC2Q92887 1545 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 RICTORQ6R327 1708 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 MYO5CQ9NQX4 1742 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 POLA1P09884 1462 aaPredicted RBP1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 NCAPD3P42695 1498 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 RAD54L2Q9Y4B4 1467 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 ADGBQ8N7X0 1667 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 TOP2BQ02880 1626 aa1.48□□□□□ -2.17
SMARCB1-209ENST00000635578 FRMPD1Q5SYB0 1578 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 WDR27A2RRH5 827 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 FAM90A10PA6NDY2 464 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 PRSS44E7EML9 344 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 GTPBP1O00178 669 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 TEX33O43247 280 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 XPOTO43592 962 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 ZEB2O60315 1214 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 GPR32O75388 356 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 JTBO76095 146 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 SUN1O94901 812 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 AGFG2O95081 481 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 MYBL2P10244 700 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 OSMP13725 252 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 GSPT1P15170 499 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 ZFXP17010 805 aaPredicted RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 NDUFB7P17568 137 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 POU3F2P20265 443 aaPredicted RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 MCAMP43121 646 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 THBS3P49746 956 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms