RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CDH8P55286 799 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 GCNT1Q02742 428 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 TAP1Q03518 808 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 SOWAHAQ2M3V2 549 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 ZNF697Q5TEC3 545 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 FAM171A1Q5VUB5 890 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 CACNA2D4Q7Z3S7 1137 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 PPFIBP1Q86W92 1011 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 ZNF397Q8NF99 534 aaPredicted RBP15.44■□□□□ 0.06
LINC00339-208ENST00000634934 SUSD3Q96L08 255 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 FAM81BQ96LP2 452 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 KREMEN1Q96MU8 473 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 C17orf80Q9BSJ5 609 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 NUP58Q9BVL2 599 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 GPR62Q9BZJ7 368 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 ZNF576Q9H609 170 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 AJAP1Q9UKB5 411 aaPredicted RBP15.44■□□□□ 0.06
LINC00339-208ENST00000634934 L1RE1Q9UN81 338 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 RWDD3Q9Y3V2 267 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 M0QZQ0 153 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 FGF18O76093 207 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 SLU7O95391 586 aaKnown RBP15.43■□□□□ 0.06
LINC00339-208ENST00000634934 RFX1P22670 979 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 ELAVL2Q12926 359 aaKnown RBP15.43■□□□□ 0.06
LINC00339-208ENST00000634934 TBX2Q13207 712 aaPredicted RBP15.43■□□□□ 0.06
LINC00339-208ENST00000634934 WSCD1Q658N2 575 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 ENOSF1Q7L5Y1 443 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 CEP57Q86XR8 500 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 ADGRF2Q8IZF7 708 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 TOP6BLQ8N6T0 577 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 KLHL23Q8NBE8 558 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 PPP1R13BQ96KQ4 1090 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 SPAG5Q96R06 1193 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 BCO2Q9BYV7 579 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 SDCBP2Q9H190 292 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 CYP3A43Q9HB55 503 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 CEP72Q9P209 647 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 PCDHB8Q9UN66 801 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 COL4A4P53420 1690 aaPredicted RBP15.43■□□□□ 0.06
LINC00339-208ENST00000634934 ARHGEF37A1IGU5 675 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 TPM1P09493 284 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 TKTP29401 623 aaKnown RBP15.43■□□□□ 0.06
LINC00339-208ENST00000634934 USP8P40818 1118 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 YWHAEP62258 255 aaKnown RBP15.43■□□□□ 0.06
LINC00339-208ENST00000634934 KRT17Q04695 432 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 ARID5BQ14865 1188 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 GRIN2CQ14957 1233 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 GPR153Q6NV75 609 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 METTL23Q86XA0 190 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 FAXDC2Q96IV6 333 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 B3GALT6Q96L58 329 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 TGS1Q96RS0 853 aaKnown RBP15.43■□□□□ 0.06
LINC00339-208ENST00000634934 MRPL45Q9BRJ2 306 aaKnown RBP15.43■□□□□ 0.06
LINC00339-208ENST00000634934 NAA15Q9BXJ9 866 aaKnown RBP15.43■□□□□ 0.06
LINC00339-208ENST00000634934 ZMYND15Q9H091 742 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 SNX25Q9H3E2 840 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 CISHQ9NSE2 258 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 FAM53CQ9NYF3 392 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 DSEQ9UL01 958 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 PCDHB4Q9Y5E5 795 aa15.43■□□□□ 0.06
LINC00339-208ENST00000634934 EPOPA6NHQ4 379 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 USP27XA6NNY8 438 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 ARHGAP6O43182 974 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 GYPCP04921 128 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 KRT5P13647 590 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 TRIM14Q14142 442 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 DRAP1Q14919 205 aaPredicted RBP15.42■□□□□ 0.06
LINC00339-208ENST00000634934 FIGNQ5HY92 759 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 DPH6Q7L8W6 267 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 TAS1R1Q7RTX1 841 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 TMEM86AQ8N2M4 240 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 OR6B3Q8NGW1 331 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 IQCDQ96DY2 449 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 PLVAPQ9BX97 442 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 VN1R3Q9BXE9 311 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 STK33Q9BYT3 514 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 TTYH3Q9C0H2 523 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 FBXL5Q9UKA1 691 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 DAAM1Q9Y4D1 1078 aa15.42■□□□□ 0.06
LINC00339-208ENST00000634934 REV3LO60673 3130 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 RFXAPO00287 272 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 SYN3O14994 580 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 ZSCAN12O43309 604 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 TACC1O75410 805 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 PNMA6AP0CW24 399 aaPredicted RBP15.41■□□□□ 0.06
LINC00339-208ENST00000634934 TYMPP19971 482 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 FGFR3P22607 806 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 CASP14P31944 242 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 GNL1P36915 607 aaPredicted RBP15.41■□□□□ 0.06
LINC00339-208ENST00000634934 ERVK-21P61565 698 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 ETF1P62495 437 aaKnown RBP15.41■□□□□ 0.06
LINC00339-208ENST00000634934 PLCB3Q01970 1234 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 DMTNQ08495 405 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 USP41Q3LFD5 358 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 ZNF394Q53GI3 561 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 OVOS1Q6IE37 1185 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 KIAA1841Q6NSI8 718 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 TMEM270Q6UE05 265 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 LIMS2Q7Z4I7 341 aa15.41■□□□□ 0.06
LINC00339-208ENST00000634934 DDX53Q86TM3 631 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms