RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PRR33A8MZF0 331 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 N4BP1O75113 896 aaKnown RBP16.87■□□□□ 0.29
LINC00339-207ENST00000634712 CLSTN1O94985 981 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 RHOP08100 348 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 LAMP2P13473 410 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 RPL13P26373 211 aaKnown RBP16.87■□□□□ 0.29
LINC00339-207ENST00000634712 AP3M2P53677 418 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 EPHB3P54753 998 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 MYL7Q01449 175 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 TSPY1Q01534 308 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 SMARCB1Q12824 385 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 CYP4A22Q5TCH4 519 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 TRIM67Q6ZTA4 783 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 DENND4AQ7Z401 1863 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 PDCL2Q8N4E4 241 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 TOP6BLQ8N6T0 577 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 OR10T2Q8NGX3 314 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 CXorf38Q8TB03 319 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 TMEM174Q8WUU8 243 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 GSDMAQ96QA5 445 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 TMEM209Q96SK2 561 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 ZCWPW1Q9H0M4 648 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 KCNK12Q9HB15 430 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 EPS15L1Q9UBC2 864 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 CDH7Q9ULB5 785 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 TRAF3IP3Q9Y228 551 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 SLC27A5Q9Y2P5 690 aa16.87■□□□□ 0.29
LINC00339-207ENST00000634712 MTMR11A4FU01 709 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 ZNF197O14709 1029 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 LHX1P48742 406 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 TUFMP49411 452 aaKnown RBP16.86■□□□□ 0.29
LINC00339-207ENST00000634712 SIGLEC14Q08ET2 396 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 BIRC3Q13489 604 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 TDGQ13569 410 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 CENPPQ6IPU0 288 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 PDZD4Q76G19 769 aaPredicted RBP16.86■□□□□ 0.29
LINC00339-207ENST00000634712 DPH6Q7L8W6 267 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 ATAD1Q8NBU5 361 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 ITFG1Q8TB96 612 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 C2orf15Q8WU43 125 aaKnown RBP16.86■□□□□ 0.29
LINC00339-207ENST00000634712 NXPE3Q969Y0 559 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 MMS19Q96T76 1030 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 GTPBP4Q9BZE4 634 aaKnown RBP16.86■□□□□ 0.29
LINC00339-207ENST00000634712 C11orf16Q9NQ32 467 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 DDX43Q9NXZ2 648 aaKnown RBP16.86■□□□□ 0.29
LINC00339-207ENST00000634712 L1RE1Q9UN81 338 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 YIPF1Q9Y548 306 aa16.86■□□□□ 0.29
LINC00339-207ENST00000634712 DOCK6Q96HP0 2047 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 TMEM221A6NGB7 291 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 M0R296 226 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 CST3P01034 146 aaPredicted RBP16.85■□□□□ 0.29
LINC00339-207ENST00000634712 NR2F2P24468 414 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 CASP4P49662 377 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 ADAM9Q13443 819 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 SCARA3Q6AZY7 606 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 ADGRF2Q8IZF7 708 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 SPATA18Q8TC71 538 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 PARD3BQ8TEW8 1205 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 FGF13Q92913 245 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 SEPT5Q99719 369 aaPredicted RBP16.85■□□□□ 0.29
LINC00339-207ENST00000634712 RTP3Q9BQQ7 232 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 ACBD6Q9BR61 282 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 HSFX1Q9UBD0 423 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 PCDHA5Q9Y5H7 936 aa16.85■□□□□ 0.29
LINC00339-207ENST00000634712 GADD45BO75293 160 aaPredicted RBP16.84■□□□□ 0.29
LINC00339-207ENST00000634712 KRT13P13646 458 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 PCSK1P29120 753 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 TNNC1P63316 161 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 NFE2Q16621 373 aaPredicted RBP16.84■□□□□ 0.29
LINC00339-207ENST00000634712 NFIL3Q16649 462 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 MGAT5BQ3V5L5 792 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 ZNF658Q5TYW1 1059 aaPredicted RBP16.84■□□□□ 0.29
LINC00339-207ENST00000634712 ELOA2Q8IYF1 753 aaPredicted RBP16.84■□□□□ 0.29
LINC00339-207ENST00000634712 SMYD4Q8IYR2 804 aaPredicted RBP16.84■□□□□ 0.29
LINC00339-207ENST00000634712 LEMD2Q8NC56 503 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 FAM200AQ8TCP9 573 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 SPPL2BQ8TCT7 592 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 ING5Q8WYH8 240 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 ZNF516Q92618 1163 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 ERCC4Q92889 916 aaPredicted RBP16.84■□□□□ 0.29
LINC00339-207ENST00000634712 SYAP1Q96A49 352 aaPredicted RBP16.84■□□□□ 0.29
LINC00339-207ENST00000634712 PBXIP1Q96AQ6 731 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 AVENQ9NQS1 362 aaPredicted RBP16.84■□□□□ 0.29
LINC00339-207ENST00000634712 ASAH2Q9NR71 780 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 CEP72Q9P209 647 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 ASB3Q9Y575 518 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 PCDHB5Q9Y5E4 795 aa16.84■□□□□ 0.29
LINC00339-207ENST00000634712 LRRIQ3A6PVS8 624 aaPredicted RBP16.83■□□□□ 0.28
LINC00339-207ENST00000634712 VNN2O95498 520 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 MYL4P12829 197 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 ATICP31939 592 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 PSMC2P35998 433 aaKnown RBP16.83■□□□□ 0.28
LINC00339-207ENST00000634712 CDR1P51861 262 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 STIM1Q13586 685 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 VEPH1Q14D04 833 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 TAF12Q16514 161 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 SOWAHAQ2M3V2 549 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 WDR72Q3MJ13 1102 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 MTSS1LQ765P7 747 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 ITIH5Q86UX2 942 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms