RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TMEM191BP0C7N4 346 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 CHRNB2P17787 502 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 AXLP30530 894 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 GRM5P41594 1212 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 MYL6P60660 151 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 GNG11P61952 73 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 NOP14P78316 857 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 MRPS6P82932 125 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 DUOXA2Q1HG44 320 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 CCDC122Q5T0U0 273 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 NOTUMQ6P988 496 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 SLC27A1Q6PCB7 646 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 ENOSF1Q7L5Y1 443 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 NOP9Q86U38 636 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 SLC47A2Q86VL8 602 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 GLYCTKQ8IVS8 523 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 UBR7Q8N806 425 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 C1orf127Q8N9H9 656 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 KIF18AQ8NI77 898 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 DDX1Q92499 740 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.781e-6■■■■□ 20.4
PDLIM5-223ENST00000627587 JAKMIP2Q96AA8 810 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 MS4A3Q96HJ5 214 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 C11orf84Q9BUA3 381 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 IMPG2Q9BZV3 1241 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 TSGA10Q9BZW7 698 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 NXF3Q9H4D5 531 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 GUCA1BQ9UMX6 200 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 NOC2LQ9Y3T9 749 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 CDY2AQ9Y6F7 541 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 REV3LO60673 3130 aa10.18□□□□□ -0.78
PDLIM5-223ENST00000627587 CYP26A1O43174 497 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 CLSTN1O94985 981 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 IL9P15248 144 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 BMPR1AP36894 532 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 MAGEA1P43355 309 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 TFAMQ00059 246 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 KIF5AQ12840 1032 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 BMS1Q14692 1282 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 TCEAL5Q5H9L2 206 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 ALKAL1Q6UXT8 129 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 ANKRD36BP1Q96IX9 119 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 ZMAT2Q96NC0 199 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 ACAP3Q96P50 834 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 PLVAPQ9BX97 442 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 ASB7Q9H672 318 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 TAS2R14Q9NYV8 317 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 CNTN6Q9UQ52 1028 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 PAXBP1Q9Y5B6 917 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 CAPN6Q9Y6Q1 641 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 DCXO43602 365 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 TNNC2P02585 160 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 CTSHP09668 335 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 GUCY2FP51841 1108 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 CUL2Q13617 745 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 NAB2Q15742 525 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 ZBTB6Q15916 424 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 ALKBH5Q6P6C2 394 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 SLC35F6Q8N357 371 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 PCDHB18PQ96TA0 734 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 CCDC94Q9BW85 323 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 TRIM6Q9C030 488 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 SNTG2Q9NY99 539 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 MYO1AQ9UBC5 1043 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 PIN4Q9Y237 131 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 SQORQ9Y6N5 450 aa10.17□□□□□ -0.78
PDLIM5-223ENST00000627587 FAM86C2PA6NEL3 165 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 CYP11B1P15538 503 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 TBXAS1P24557 533 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 USP8P40818 1118 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 FMO1Q01740 532 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 TRPC3Q13507 836 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 ZNF569Q5MCW4 686 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 C10orf76Q5T2E6 689 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 ADHFE1Q8IWW8 467 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 SMG8Q8ND04 991 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 PPP2R3CQ969Q6 453 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 SNX27Q96L92 541 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 AGPAT1Q99943 283 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 AGO3Q9H9G7 860 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 L2HGDHQ9H9P8 463 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 C2CD2Q9Y426 696 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 TRPV2Q9Y5S1 764 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 ATP8B3O60423 1300 aa10.16□□□□□ -0.78
PDLIM5-223ENST00000627587 BRWD1Q9NSI6 2320 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 MACROD2A1Z1Q3 448 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 ENPP3O14638 875 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 ATMINO43313 823 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 RECQL4O94761 1208 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 MMEP08473 750 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 CTNNB1P35222 781 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 ASPAP45381 313 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 ZNF132P52740 706 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 CTC1Q2NKJ3 1217 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 SGSM1Q2NKQ1 1148 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 NT5DC4Q86YG4 428 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 CD302Q8IX05 232 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 CLP1Q92989 425 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms