RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 ARHGAP44Q17R89 818 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 LRIT3Q3SXY7 679 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 ARSIQ5FYB1 569 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 WSCD1Q658N2 575 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 SPECC1LQ69YQ0 1117 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 IQCEQ6IPM2 695 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.11□□□□□ -0.95
SGMS1-211ENST00000626236 TAS1R1Q7RTX1 841 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 CACNA2D4Q7Z3S7 1137 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 TMC6Q7Z403 805 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 DDX53Q86TM3 631 aaKnown RBP9.11□□□□□ -0.95
SGMS1-211ENST00000626236 METTL23Q86XA0 190 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 VSTM4Q8IW00 320 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 DRC7Q8IY82 874 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 ADGRF2Q8IZF7 708 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 PDCL2Q8N4E4 241 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 ARNTL2Q8WYA1 636 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 KAT5Q92993 513 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 B3GALT6Q96L58 329 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 FAM81BQ96LP2 452 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 MRPL45Q9BRJ2 306 aaKnown RBP9.11□□□□□ -0.95
SGMS1-211ENST00000626236 C11orf84Q9BUA3 381 aaPredicted RBP9.11□□□□□ -0.95
SGMS1-211ENST00000626236 HERC2P3Q9BVR0 1158 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 BCO2Q9BYV7 579 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 SDCBP2Q9H190 292 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 SNX25Q9H3E2 840 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 ALG13Q9NP73 1137 aaKnown RBP9.11□□□□□ -0.95
SGMS1-211ENST00000626236 NLRC4Q9NPP4 1024 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 DNAJC12Q9UKB3 198 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 DSEQ9UL01 958 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 FHOD1Q9Y613 1164 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 LAMA3Q16787 3333 aa9.11□□□□□ -0.95
SGMS1-211ENST00000626236 ITIH6Q6UXX5 1313 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 C2CD2LO14523 706 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 SYN3O14994 580 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 TACC1O75410 805 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 EFEMP2O95967 443 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 CYP11A1P05108 521 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 RB1P06400 928 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 TYMPP19971 482 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 FGFR3P22607 806 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 RFX1P22670 979 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 USP8P40818 1118 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 YWHAEP62258 255 aaKnown RBP9.1□□□□□ -0.95
SGMS1-211ENST00000626236 YWHAHQ04917 246 aaPredicted RBP9.1□□□□□ -0.95
SGMS1-211ENST00000626236 GPM6BQ13491 265 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 USP41Q3LFD5 358 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 RTP2Q5QGT7 225 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 VARS2Q5ST30 1063 aaKnown RBP9.1□□□□□ -0.95
SGMS1-211ENST00000626236 OVOS1Q6IE37 1185 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 KIAA1841Q6NSI8 718 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 ENOSF1Q7L5Y1 443 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 DPH6Q7L8W6 267 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 OSTM1Q86WC4 334 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 RNF168Q8IYW5 571 aaPredicted RBP9.1□□□□□ -0.95
SGMS1-211ENST00000626236 VPS52Q8N1B4 723 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 TMEM86AQ8N2M4 240 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 OR6B3Q8NGW1 331 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 CPLX3Q8WVH0 158 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 POF1BQ8WVV4 589 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 KBTBD7Q8WVZ9 684 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 RIN2Q8WYP3 895 aaPredicted RBP9.1□□□□□ -0.95
SGMS1-211ENST00000626236 FAXDC2Q96IV6 333 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 KREMEN1Q96MU8 473 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 SPAG5Q96R06 1193 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 TTPALQ9BTX7 342 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 NUP58Q9BVL2 599 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 NAA15Q9BXJ9 866 aaKnown RBP9.1□□□□□ -0.95
SGMS1-211ENST00000626236 CYP3A43Q9HB55 503 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 CISHQ9NSE2 258 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 CEP72Q9P209 647 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 STK39Q9UEW8 545 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 PUF60Q9UHX1 559 aaKnown RBP9.1□□□□□ -0.95
SGMS1-211ENST00000626236 FBXL5Q9UKA1 691 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 PCDHB4Q9Y5E5 795 aa9.1□□□□□ -0.95
SGMS1-211ENST00000626236 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.1□□□□□ -0.951e-7■□□□□ 9.2
SGMS1-211ENST00000626236 CHD7Q9P2D1 2997 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 A8MXQ7 604 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 H3BNC9 293 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 GRM6O15303 877 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 HCRTO43612 131 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 CILPO75339 1184 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 URODP06132 367 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 TPM1P09493 284 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 PDGFRBP09619 1106 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 PNMA6AP0CW24 399 aaPredicted RBP9.09□□□□□ -0.95
SGMS1-211ENST00000626236 KRT5P13647 590 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 ACO1P21399 889 aaKnown RBP9.09□□□□□ -0.95
SGMS1-211ENST00000626236 WARSP23381 471 aaKnown RBP9.09□□□□□ -0.95
SGMS1-211ENST00000626236 ACAT1P24752 427 aaKnown RBP9.09□□□□□ -0.95
SGMS1-211ENST00000626236 DNAJB1P25685 340 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 GNL1P36915 607 aaPredicted RBP9.09□□□□□ -0.95
SGMS1-211ENST00000626236 LHX1P48742 406 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 GLUD2P49448 558 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 NDST1P52848 882 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 INCA1Q0VD86 236 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 ORC1Q13415 861 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 TRIM14Q14142 442 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 DRAP1Q14919 205 aaPredicted RBP9.09□□□□□ -0.95
SGMS1-211ENST00000626236 PSMD5Q16401 504 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms