RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 EPCAMP16422 314 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 GAP43P17677 238 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 MTHFRP42898 656 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 AMPD3Q01432 767 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 DSG1Q02413 1049 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 ZP2Q05996 745 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 DPYDQ12882 1025 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 KCNC3Q14003 757 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 BECN1Q14457 450 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 CBX2Q14781 532 aaPredicted RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 NOLC1Q14978 699 aaKnown RBP eCLIP6.97□□□□□ -1.29
TCF4-249ENST00000625716 RSPO4Q2I0M5 234 aaPredicted RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 GLRA4Q5JXX5 417 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 NKAPLQ5M9Q1 402 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 RARS2Q5T160 578 aaKnown RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 FAM171A1Q5VUB5 890 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 ATL3Q6DD88 541 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 SLFN12LQ6IEE8 588 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 USP49Q70CQ1 688 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 TAS1R1Q7RTX1 841 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 PDILTQ8N807 584 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 LINC00301Q8NCQ3 95 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 KCNG4Q8TDN1 519 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 HASPINQ8TF76 798 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 RIN2Q8WYP3 895 aaPredicted RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 ZBTB45Q96K62 511 aaPredicted RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 RPGRIP1Q96KN7 1286 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 NECTIN4Q96NY8 510 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 TTPALQ9BTX7 342 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 PHF7Q9BWX1 381 aaPredicted RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 VN1R3Q9BXE9 311 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 GPR62Q9BZJ7 368 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 ADAM7Q9H2U9 754 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 MRPL44Q9H9J2 332 aaKnown RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 PLXNA4Q9HCM2 1894 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 PTPRHQ9HD43 1115 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 SEL1LQ9UBV2 794 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 EXOC7Q9UPT5 735 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 NR2E1Q9Y466 385 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 NUB1Q9Y5A7 615 aa6.97□□□□□ -1.29
TCF4-249ENST00000625716 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 MORC2Q9Y6X9 1032 aaPredicted RBP6.97□□□□□ -1.29
TCF4-249ENST00000625716 F8W810 466 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 TEX28O15482 410 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 XPOTO43592 962 aaKnown RBP6.96□□□□□ -1.3
TCF4-249ENST00000625716 B3GAT3O94766 335 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 BRD1O95696 1058 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 CLTAP09496 248 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 PROZP22891 400 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 NMT1P30419 496 aaKnown RBP6.96□□□□□ -1.3
TCF4-249ENST00000625716 RPL9P32969 192 aaKnown RBP6.96□□□□□ -1.3
TCF4-249ENST00000625716 ME1P48163 572 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 CLCN4P51793 760 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 CLCNKBP51801 687 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 ZNF131P52739 623 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 GTF2BQ00403 316 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 PPP2R3AQ06190 1150 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 MCL1Q07820 350 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 SEZ6Q53EL9 994 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 HERC4Q5GLZ8 1057 aaPredicted RBP6.96□□□□□ -1.3
TCF4-249ENST00000625716 KIAA0319Q5VV43 1072 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 SYCE2Q6PIF2 218 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 STXBP4Q6ZWJ1 553 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 PALB2Q86YC2 1186 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 GLYCTKQ8IVS8 523 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 CCDC65Q8IXS2 484 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 GPR65Q8IYL9 337 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 SYCP3Q8IZU3 236 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 C12orf76Q8N812 135 aaPredicted RBP6.96□□□□□ -1.3
TCF4-249ENST00000625716 CEP120Q8N960 986 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 IQUBQ8NA54 791 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 SLC22A17Q8WUG5 538 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 B3GALT6Q96L58 329 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 SNX27Q96L92 541 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 PPP1R10Q96QC0 940 aaKnown RBP6.96□□□□□ -1.3
TCF4-249ENST00000625716 HINFPQ9BQA5 517 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 PAAF1Q9BRP4 392 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 MSTO1Q9BUK6 570 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 S1PR5Q9H228 398 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 CUEDC2Q9H467 287 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 SFXN1Q9H9B4 322 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 RPF1Q9H9Y2 349 aaKnown RBP6.96□□□□□ -1.3
TCF4-249ENST00000625716 RXFP1Q9HBX9 757 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 CD320Q9NPF0 282 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 TPSG1Q9NRR2 321 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 CHST7Q9NS84 486 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 PANK4Q9NVE7 773 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 CNTN3Q9P232 1028 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 FNIP2Q9P278 1114 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 CACNG4Q9UBN1 327 aa6.96□□□□□ -1.3
TCF4-249ENST00000625716 MYMKA6NI61 221 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 PI4K2BG5E9Z4 385 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 PODXLO00592 558 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 OGTO15294 1046 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 DCXO43602 365 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 KIF4AO95239 1232 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 GCNT3O95395 438 aa6.95□□□□□ -1.3
TCF4-249ENST00000625716 C1RP00736 705 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms