RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 CPB2Q96IY4 423 aa12.33□□□□□ -0.43
CHD2-205ENST00000625662 MRPS17Q9Y2R5 130 aaKnown RBP12.33□□□□□ -0.43
CHD2-205ENST00000625662 YDJCA8MPS7 323 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 FOXP2O15409 715 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 KRT38O76015 456 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 MT-ND3P03897 115 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 AKT1P31749 480 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 RPL9P32969 192 aaKnown RBP12.33□□□□□ -0.44
CHD2-205ENST00000625662 GABPB1Q06547 395 aaPredicted RBP12.33□□□□□ -0.44
CHD2-205ENST00000625662 DMTNQ08495 405 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 PKP1Q13835 747 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 ULK4Q96C45 1275 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 IL17RAQ96F46 866 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 ASAH2Q9NR71 780 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 NDFIP2Q9NV92 336 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 SMIM35A0A1B0GVV1 85 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 CASTOR2A6NHX0 329 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 SLC37A4O43826 429 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 HIST1H2AGP0C0S8 130 aaPredicted RBP12.33□□□□□ -0.44
CHD2-205ENST00000625662 HIST1H2ADP20671 130 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 EIF4BP23588 611 aaKnown RBP12.33□□□□□ -0.44
CHD2-205ENST00000625662 JADE1Q6IE81 842 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 PID1Q7Z2X4 250 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 DDI1Q8WTU0 396 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 ALKBH8Q96BT7 664 aaKnown RBP12.33□□□□□ -0.44
CHD2-205ENST00000625662 HIST1H2AHQ96KK5 128 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 RIPOR3Q96MK2 946 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 HIST1H2AJQ99878 128 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 H2AFJQ9BTM1 129 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 UTP6Q9NYH9 597 aaKnown RBP12.33□□□□□ -0.44
CHD2-205ENST00000625662 SPG21Q9NZD8 308 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 ESRRBO95718 433 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 GCKP35557 465 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 PTK2BQ14289 1009 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 TREML2Q5T2D2 321 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 THEMIS2Q5TEJ8 643 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 TTC19Q6DKK2 380 aaPredicted RBP12.33□□□□□ -0.44
CHD2-205ENST00000625662 C12orf42Q96LP6 360 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 SNTG2Q9NY99 539 aa12.33□□□□□ -0.44
CHD2-205ENST00000625662 G3BP2Q9UN86 482 aaKnown RBP12.33□□□□□ -0.44
CHD2-205ENST00000625662 EBAG9O00559 213 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 ASS1P00966 412 aaKnown RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 ACO1P21399 889 aaKnown RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 RASSF2P50749 326 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 FPGSQ05932 587 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 RETSATQ6NUM9 610 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 SMARCD1Q96GM5 515 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 RPRD1AQ96P16 312 aaPredicted RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 MON2Q7Z3U7 1717 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 RENBPP51606 427 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 DR1Q01658 176 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 CCDC92Q53HC0 331 aaPredicted RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 BOLA3Q53S33 107 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 TIGD7Q6NT04 549 aaPredicted RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 CAPN12Q6ZSI9 719 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 KIRREL3Q8IZU9 778 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 FBXL16Q8N461 479 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 CFAP36Q96G28 342 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 TMEM60Q9H2L4 133 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 FZD1Q9UP38 647 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 PFKMP08237 780 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 YWHAQP27348 245 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 RFC2P35250 354 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 PABPC5Q96DU9 382 aaKnown RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 UBIAD1Q9Y5Z9 338 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 COL1A1P02452 1464 aaPredicted RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 LZTS3O60299 673 aaPredicted RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 DPYDQ12882 1025 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 GRIK3Q13003 919 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 ZC2HC1CQ53FD0 456 aaPredicted RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 ANKRD40Q6AI12 368 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 ATL2Q8NHH9 583 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 GPT2Q8TD30 523 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 CDC23Q9UJX2 597 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 MRPS23Q9Y3D9 190 aaKnown RBP12.32□□□□□ -0.44
CHD2-205ENST00000625662 LMO7Q8WWI1 1683 aa12.32□□□□□ -0.44
CHD2-205ENST00000625662 TRAV19A0A0A6YYK7 116 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 SPATA31C2B4DYI2 1134 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 NVLO15381 856 aaKnown RBP12.31□□□□□ -0.44
CHD2-205ENST00000625662 ALDH1A2O94788 518 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 BST2Q10589 180 aaKnown RBP12.31□□□□□ -0.44
CHD2-205ENST00000625662 AAK1Q2M2I8 961 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 CALML6Q8TD86 181 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 OSCP1Q8WVF1 389 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 RUSC1Q9BVN2 902 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 WDCPQ9H6R7 721 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 DMAP1Q9NPF5 467 aaPredicted RBP12.31□□□□□ -0.44
CHD2-205ENST00000625662 DDX43Q9NXZ2 648 aaKnown RBP12.31□□□□□ -0.44
CHD2-205ENST00000625662 POC1B-GALNT4F8VUJ3 575 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 ZMYND10O75800 440 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 PRAMEF19Q5SWL8 479 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 GPAT2Q6NUI2 795 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 MTHFD1LQ6UB35 978 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 PDCD7Q8N8D1 485 aaKnown RBP12.31□□□□□ -0.44
CHD2-205ENST00000625662 KRT82Q9NSB4 513 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 ABCF3Q9NUQ8 709 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 NALCNQ8IZF0 1738 aa12.31□□□□□ -0.44
CHD2-205ENST00000625662 SMAPO00193 183 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms