RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 OR6C75A6NL08 312 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 ANHXE9PGG2 379 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 PIRO00625 290 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 PRRG1O14668 218 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
PNKP-217ENST00000625216 KIF20AO95235 890 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 ADCY5O95622 1261 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 LRG1P02750 347 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 AVPR2P30518 371 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 ZNF75DP51815 510 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 ARPP19P56211 112 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 LILRA4P59901 499 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 LRRC63Q05C16 580 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 TPD52L1Q16890 204 aaPredicted RBP13.63□□□□□ -0.23
PNKP-217ENST00000625216 KNOP1Q1ED39 458 aaKnown RBP13.63□□□□□ -0.23
PNKP-217ENST00000625216 C9orf57Q5W0N0 161 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 FOXR2Q6PJQ5 311 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 CRELD2Q6UXH1 353 aaPredicted RBP13.63□□□□□ -0.23
PNKP-217ENST00000625216 GET4Q7L5D6 327 aaPredicted RBP13.63□□□□□ -0.23
PNKP-217ENST00000625216 ZC3H3Q8IXZ2 948 aaKnown RBP13.63□□□□□ -0.23
PNKP-217ENST00000625216 SLC44A3Q8N4M1 653 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 CYP4F11Q9HBI6 524 aa13.63□□□□□ -0.23
PNKP-217ENST00000625216 DNMT3BQ9UBC3 853 aaKnown RBP13.63□□□□□ -0.23
PNKP-217ENST00000625216 TISP43B9A030 160 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 TGFB1I1O43294 461 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 ODC1P11926 461 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 PTPN2P17706 415 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 CLCN5P51795 746 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 FANCCQ00597 558 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 MYBPC2Q14324 1141 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 PABPC1LQ4VXU2 614 aaKnown RBP13.62□□□□□ -0.23
PNKP-217ENST00000625216 APTXQ7Z2E3 356 aaKnown RBP13.62□□□□□ -0.23
PNKP-217ENST00000625216 CSGALNACT2Q8N6G5 542 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 FGF13Q92913 245 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 PDLIM2Q96JY6 352 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 SENP8Q96LD8 212 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 TSG101Q99816 390 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 SRRTQ9BXP5 876 aaKnown RBP13.62□□□□□ -0.23
PNKP-217ENST00000625216 IRF2BPLQ9H1B7 796 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 SMOC2Q9H3U7 446 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 THAP9Q9H5L6 903 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 WNT16Q9UBV4 365 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 DSEQ9UL01 958 aa13.62□□□□□ -0.23
PNKP-217ENST00000625216 PLXNA3P51805 1871 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 ZNF197O14709 1029 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 EXTL3O43909 919 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 MICAL2O94851 1124 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 CYP11A1P05108 521 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 NFICP08651 508 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 SRFP11831 508 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 CPB1P15086 417 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 GUCY2FP51841 1108 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 PTPN5P54829 565 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 NTHL1P78549 312 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 ADCY1Q08828 1119 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 GPR17Q13304 367 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 HTR4Q13639 388 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 EDRF1Q3B7T1 1238 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 IQCEQ6IPM2 695 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 MTSS1LQ765P7 747 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 ELMOD1Q8N336 334 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 NOC3LQ8WTT2 800 aaKnown RBP13.61□□□□□ -0.23
PNKP-217ENST00000625216 CACTINQ8WUQ7 758 aaKnown RBP13.61□□□□□ -0.23
PNKP-217ENST00000625216 RSAD2Q8WXG1 361 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 EEF2KMTQ96G04 330 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 FAM213AQ9BRX8 229 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 TRIM5Q9C035 493 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 MFSD1Q9H3U5 465 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 INTS13Q9NVM9 706 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 DPP3Q9NY33 737 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 GDE1Q9NZC3 331 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 IFNKQ9P0W0 207 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 FBXL21Q9UKT6 434 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 TRAF3IP3Q9Y228 551 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 MRPS23Q9Y3D9 190 aaKnown RBP13.61□□□□□ -0.23
PNKP-217ENST00000625216 TIMM13Q9Y5L4 95 aaPredicted RBP13.61□□□□□ -0.23
PNKP-217ENST00000625216 INSL5Q9Y5Q6 135 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 ZDBF2Q9HCK1 2354 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 MUC6Q6W4X9 2439 aa13.61□□□□□ -0.23
PNKP-217ENST00000625216 MTCL1Q9Y4B5 1905 aaKnown RBP13.6□□□□□ -0.23
PNKP-217ENST00000625216 KCNJ18B7U540 433 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 PDXKO00764 312 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 CITO14578 2027 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 SEC24AO95486 1093 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 PDGFBP01127 241 aaPredicted RBP13.6□□□□□ -0.23
PNKP-217ENST00000625216 RHOP08100 348 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 PNPLA4P41247 253 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 TAF6P49848 677 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 KCNJ12Q14500 433 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 KRT31Q15323 416 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 IER5LQ5T953 404 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 CYP4A22Q5TCH4 519 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 ASTLQ6HA08 431 aaPredicted RBP13.6□□□□□ -0.23
PNKP-217ENST00000625216 OVOS1Q6IE37 1185 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 ARMCX5Q6P1M9 558 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 DENND4AQ7Z401 1863 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 BRSK2Q8IWQ3 736 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 LEMD2Q8NC56 503 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 ITFG1Q8TB96 612 aa13.6□□□□□ -0.23
PNKP-217ENST00000625216 CNOT6LQ96LI5 555 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms