RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ZNF844Q08AG5 666 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 LLGL1Q15334 1064 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 ZSCAN26Q16670 478 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 DGKDQ16760 1214 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 SLC10A6Q3KNW5 377 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 SH2D3CQ8N5H7 860 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 C1orf54Q8WWF1 131 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 HERPUD2Q9BSE4 406 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 VRTNQ9H8Y1 702 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 ATP8A1Q9Y2Q0 1164 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 PTPN22Q9Y2R2 807 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 TSPAN1O60635 241 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 ITGB3P05106 788 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 ATICP31939 592 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 EMC10Q5UCC4 262 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 DNAJC24Q6P3W2 148 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 OR2W6PQ8NHA6 318 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 EXD1Q8NHP7 514 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 NPLOC4Q8TAT6 608 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 FAM129AQ9BZQ8 928 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 KAT6AQ92794 2004 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 SLC15A5A6NIM6 579 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 MED7O43513 233 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 PAEPP09466 180 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 MYZAPP0CAP1 466 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 TAP1Q03518 808 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 KLF1Q13351 362 aaPredicted RBP20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 PPP1R15BQ5SWA1 713 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 ZNF410Q86VK4 478 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 ERICH1Q86X53 443 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 KIAA0319LQ8IZA0 1049 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 LHX5Q9H2C1 402 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 USTQ9Y2C2 406 aa20.9■□□□□ 0.94
PCDHB11-202ENST00000624887 ZNF236Q9UL36 1845 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 A0A1B0GUA9 196 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 RALAP11233 206 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 RAP1GAPP47736 663 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 RAD23BP54727 409 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 RUFY4Q6ZNE9 571 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 CCDC50Q8IVM0 306 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 SCLT1Q96NL6 688 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 CAPS2Q9BXY5 557 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 DCLK3Q9C098 648 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 SDCBP2Q9H190 292 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 CHST7Q9NS84 486 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 HOMER3Q9NSC5 361 aa20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 MTRF1LQ9UGC7 380 aaKnown RBP20.89■□□□□ 0.93
PCDHB11-202ENST00000624887 CDH8P55286 799 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 HNRNPH2P55795 449 aaKnown RBP20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 ZNF252P-AS1Q0IIN9 211 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 PPP1R7Q15435 360 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 DENND1BQ6P3S1 775 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 LRRC31Q6UY01 552 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 KDM7AQ6ZMT4 941 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 SYDE1Q6ZW31 735 aaPredicted RBP20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 C3orf20Q8ND61 904 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 ART4Q93070 314 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 MCEEQ96PE7 176 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 STRIP2Q9ULQ0 834 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 A6NNZ2 444 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 ADCY6O43306 1168 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 CD19P15391 556 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 SSR1P43307 286 aaKnown RBP20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 ZNF157P51786 506 aaPredicted RBP20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 PMS2P54278 862 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 SLC20A2Q08357 652 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 TMEM132DQ14C87 1099 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 TUBB8Q3ZCM7 444 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 LRRC38Q5VT99 294 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 DCUN1D2Q6PH85 259 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 RASAL3Q86YV0 1011 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 GRK7Q8WTQ7 553 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 ADPGKQ9BRR6 497 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 OSBPL8Q9BZF1 889 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 PABPC3Q9H361 631 aaKnown RBP20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 SMYD3Q9H7B4 428 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 CYP3A43Q9HB55 503 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 SLC5A4Q9NY91 659 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 FEZ2Q9UHY8 353 aaPredicted RBP20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 C2CD2Q9Y426 696 aa20.88■□□□□ 0.93
PCDHB11-202ENST00000624887 TRPM7Q96QT4 1865 aa20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 RRN3P2A6NIE6 340 aa20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 TULP2O00295 520 aa20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 IRAK1P51617 712 aa20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 EIF3BP55884 814 aaKnown RBP20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 KRT17Q04695 432 aa20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 SNX1Q13596 522 aa20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 DNAJC21Q5F1R6 531 aaKnown RBP20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 TMEM130Q8N3G9 435 aa20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 ATG4AQ8WYN0 398 aa20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 ACAP3Q96P50 834 aa20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 EPB41L4BQ9H329 900 aa20.87■□□□□ 0.93
PCDHB11-202ENST00000624887 CILPO75339 1184 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 P4HA1P13674 534 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 NR1D1P20393 614 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 POLR2BP30876 1174 aaKnown RBP20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 OGDHQ02218 1023 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 PIGHQ14442 188 aaPredicted RBP20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 SAPCD2Q86UD0 394 aa20.86■□□□□ 0.93
PCDHB11-202ENST00000624887 NT5DC4Q86YG4 428 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 204.3 ms