RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 R3HCC1Q9Y3T6 440 aaKnown RBP13.4□□□□□ -0.26
LINC00963-217ENST00000624009 TIMM13Q9Y5L4 95 aaPredicted RBP13.4□□□□□ -0.26
LINC00963-217ENST00000624009 GREB1Q4ZG55 1949 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 MTMR11A4FU01 709 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 GOLGA6L4A6NEF3 574 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 HUS1O60921 280 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 FGF19O95750 216 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 STAU1O95793 577 aaKnown RBP13.39□□□□□ -0.27
LINC00963-217ENST00000624009 ASGR2P07307 311 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 RHOP08100 348 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 LHX1P48742 406 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 TUFMP49411 452 aaKnown RBP13.39□□□□□ -0.27
LINC00963-217ENST00000624009 ARPP19P56211 112 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 NFE2Q16621 373 aaPredicted RBP13.39□□□□□ -0.27
LINC00963-217ENST00000624009 GET4Q7L5D6 327 aaPredicted RBP13.39□□□□□ -0.27
LINC00963-217ENST00000624009 NELFCDQ8IXH7 590 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 DCP1BQ8IZD4 617 aaKnown RBP13.39□□□□□ -0.27
LINC00963-217ENST00000624009 FBXL6Q8N531 539 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 SPPL2BQ8TCT7 592 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 FGF13Q92913 245 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 PBXIP1Q96AQ6 731 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 ZNF512Q96ME7 567 aaPredicted RBP13.39□□□□□ -0.27
LINC00963-217ENST00000624009 TIGD1Q96MW7 591 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 FNBP1Q96RU3 617 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 CGRRF1Q99675 332 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 ACBD6Q9BR61 282 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 MTMR12Q9C0I1 747 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 WNT16Q9UBV4 365 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 POLIQ9UNA4 740 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 AGAP1Q9UPQ3 857 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 TRAF3IP3Q9Y228 551 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 MRPS23Q9Y3D9 190 aaKnown RBP13.39□□□□□ -0.27
LINC00963-217ENST00000624009 YIPF1Q9Y548 306 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 NUP210Q8TEM1 1887 aaPredicted RBP13.39□□□□□ -0.27
LINC00963-217ENST00000624009 WDR87Q6ZQQ6 2873 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 CACNA1IQ9P0X4 2223 aa13.39□□□□□ -0.27
LINC00963-217ENST00000624009 GABRDO14764 452 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 EXOC3O60645 756 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 VNN2O95498 520 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 SRFP11831 508 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 PCSK1P29120 753 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 EPHB3P54753 998 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 MCCD1P59942 119 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-217ENST00000624009 TSPY1Q01534 308 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 FAM160A1Q05DH4 1040 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 TWF1Q12792 350 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 PRSS36Q5K4E3 855 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 CYP4A22Q5TCH4 519 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 WSCD1Q658N2 575 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 ITIH5Q86UX2 942 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 NPAS3Q8IXF0 933 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 FMR1NBQ8N0W7 255 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-217ENST00000624009 TMEM130Q8N3G9 435 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 GUF1Q8N442 669 aaKnown RBP13.38□□□□□ -0.27
LINC00963-217ENST00000624009 PDCL2Q8N4E4 241 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 SLC44A3Q8N4M1 653 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 OR10T2Q8NGX3 314 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 CHAMP1Q96JM3 812 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 GSDMAQ96QA5 445 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 RTP3Q9BQQ7 232 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 GPR88Q9GZN0 384 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 GOLPH3LQ9H4A5 285 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 ABCB6Q9NP58 842 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 ASAH2Q9NR71 780 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 SLC2A4RGQ9NR83 387 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 ZMYM5Q9UJ78 669 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 FAM186AA6NE01 2351 aa13.38□□□□□ -0.27
LINC00963-217ENST00000624009 IKBKBO14920 756 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 CLIC2O15247 247 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 CALUO43852 315 aaPredicted RBP13.37□□□□□ -0.27
LINC00963-217ENST00000624009 TNNI1P19237 187 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 ATICP31939 592 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 ALDH1A3P47895 512 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 CYP2J2P51589 502 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 MYL7Q01449 175 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 DUSP4Q13115 394 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 SNW1Q13573 536 aaKnown RBP13.37□□□□□ -0.27
LINC00963-217ENST00000624009 PDZD4Q76G19 769 aaPredicted RBP13.37□□□□□ -0.27
LINC00963-217ENST00000624009 TRAPPC11Q7Z392 1133 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 SUGP1Q8IWZ8 645 aaKnown RBP13.37□□□□□ -0.27
LINC00963-217ENST00000624009 ENGASEQ8NFI3 743 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 OR5B17Q8NGF7 314 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 SPATA20Q8TB22 786 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 NOC3LQ8WTT2 800 aaKnown RBP13.37□□□□□ -0.27
LINC00963-217ENST00000624009 PSMG2Q969U7 264 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 HPDLQ96IR7 371 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 CEP295NLQ96MC4 621 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 VRTNQ9H8Y1 702 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 RMND1Q9NWS8 449 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 HCFC1R1Q9NWW0 138 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 CEP72Q9P209 647 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 HOOK1Q9UJC3 728 aaKnown RBP13.37□□□□□ -0.27
LINC00963-217ENST00000624009 L1RE1Q9UN81 338 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 MYH10P35580 1976 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 PTPRZ1P23471 2315 aaPredicted RBP13.37□□□□□ -0.27
LINC00963-217ENST00000624009 OBSL1O75147 1896 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 PTPRJQ12913 1337 aa13.37□□□□□ -0.27
LINC00963-217ENST00000624009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.36□□□□□ -0.27
LINC00963-217ENST00000624009 SOBPA7XYQ1 873 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms