RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 CHST15Q7LFX5 561 aaPredicted RBP4.86□□□□□ -1.63
ATRX-209ENST00000623242 TTC7BQ86TV6 843 aa4.86□□□□□ -1.63
ATRX-209ENST00000623242 TAX1BP1Q86VP1 789 aa4.86□□□□□ -1.63
ATRX-209ENST00000623242 GCC1Q96CN9 775 aa4.86□□□□□ -1.63
ATRX-209ENST00000623242 CYFIP2Q96F07 1278 aa4.86□□□□□ -1.63
ATRX-209ENST00000623242 FAM193BQ96PV7 902 aaPredicted RBP4.86□□□□□ -1.63
ATRX-209ENST00000623242 CDC5LQ99459 802 aaKnown RBP4.86□□□□□ -1.63
ATRX-209ENST00000623242 VRK1Q99986 396 aaPredicted RBP4.86□□□□□ -1.63
ATRX-209ENST00000623242 PLA2G12BQ9BX93 195 aa4.86□□□□□ -1.63
ATRX-209ENST00000623242 BABAM1Q9NWV8 329 aa4.86□□□□□ -1.63
ATRX-209ENST00000623242 NR2E3Q9Y5X4 410 aa4.86□□□□□ -1.63
ATRX-209ENST00000623242 FRMPD2Q68DX3 1309 aaPredicted RBP4.86□□□□□ -1.63
ATRX-209ENST00000623242 NCAPD2Q15021 1401 aa4.86□□□□□ -1.63
ATRX-209ENST00000623242 NRAPQ86VF7 1730 aa4.86□□□□□ -1.63
ATRX-209ENST00000623242 CCDC194A0A1B0GVG4 234 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 A0A1W2PRX2 142 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 FTLP02792 175 aaPredicted RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 HSP90AA1P07900 732 aaKnown RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 EIF2S2P20042 333 aaKnown RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 HK3P52790 923 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 NPEPPSP55786 919 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 APBA1Q02410 837 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 EXOSC9Q06265 439 aaKnown RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 NOGQ13253 232 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 SLC39A6Q13433 755 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 SNAPC2Q13487 334 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 MVPQ14764 893 aaKnown RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 TWISTNBQ3B726 338 aaPredicted RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 KHDC1Q4VXA5 237 aaKnown RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 CCDC30Q5VVM6 783 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 AFMIDQ63HM1 303 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 SLFN13Q68D06 897 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 ANKS6Q68DC2 871 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 PPP4R3AQ6IN85 833 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 SWSAP1Q6NVH7 229 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 SLC4A10Q6U841 1118 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 FRMD5Q7Z6J6 570 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 RSPH3Q86UC2 560 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 KIAA0319LQ8IZA0 1049 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 CAMKK1Q8N5S9 505 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 IL17REQ8NFR9 667 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 SLC35B2Q8TB61 432 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 CASKIN2Q8WXE0 1202 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 IL17RAQ96F46 866 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 MYOCQ99972 504 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 TCF25Q9BQ70 676 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 SSBP3Q9BWW4 388 aaPredicted RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 B3GNT5Q9BYG0 378 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 SENP6Q9GZR1 1112 aaPredicted RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 TMEM60Q9H2L4 133 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 ARNT2Q9HBZ2 717 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 RGS17Q9UGC6 210 aaPredicted RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 SLC23A1Q9UHI7 598 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 PCDHA3Q9Y5H8 950 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 PLEKHG2Q9H7P9 1386 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 DISP2A7MBM2 1401 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 PARP4Q9UKK3 1724 aaKnown RBP4.85□□□□□ -1.63
ATRX-209ENST00000623242 RGPD2P0DJD1 1756 aa4.85□□□□□ -1.63
ATRX-209ENST00000623242 RGPD1P0DJD0 1748 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 GLI3P10071 1580 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 RGS12O14924 1447 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 PTPRCP08575 1304 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 ZNF521Q96K83 1311 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 CXorf49A8MYA2 514 aaPredicted RBP4.84□□□□□ -1.63
ATRX-209ENST00000623242 NT5C1B-RDH14C9J2C7 533 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 TPP1O14773 563 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 GPR42O15529 346 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 HOXA3O43365 443 aaPredicted RBP4.84□□□□□ -1.63
ATRX-209ENST00000623242 BCAR3O75815 825 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 DDX58O95786 925 aaKnown RBP4.84□□□□□ -1.63
ATRX-209ENST00000623242 MAP4K4O95819 1239 aaPredicted RBP4.84□□□□□ -1.63
ATRX-209ENST00000623242 GNAI3P08754 354 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 MALP21145 153 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 FLT3LGP49771 235 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 CCT4P50991 539 aaKnown RBP4.84□□□□□ -1.63
ATRX-209ENST00000623242 AGFG1P52594 562 aaKnown RBP4.84□□□□□ -1.63
ATRX-209ENST00000623242 CTSWP56202 376 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 CTXN1P60606 82 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 NKX6-1P78426 367 aaPredicted RBP4.84□□□□□ -1.63
ATRX-209ENST00000623242 SP140Q13342 867 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 RAB39AQ14964 217 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 SURF1Q15526 300 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 HSP90AB4PQ58FF6 505 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 FAM47AQ5JRC9 791 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 ZFYVE27Q5T4F4 411 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 TCTN3Q6NUS6 607 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 FAM111BQ6SJ93 734 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 NPNTQ6UXI9 565 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 TTLL10Q6ZVT0 673 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 C3orf20Q8ND61 904 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 FAM156AQ8NDB6 213 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 KLHDC4Q8TBB5 520 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 BORCS6Q96GS4 357 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 TMEM176AQ96HP8 235 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 NT5C1BQ96P26 610 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 LSM14BQ9BX40 385 aaKnown RBP4.84□□□□□ -1.63
ATRX-209ENST00000623242 ZCCHC4Q9H5U6 513 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 PARD6AQ9NPB6 346 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 DDX21Q9NR30 783 aaKnown RBP eCLIP4.84□□□□□ -1.63
ATRX-209ENST00000623242 CALCOCO1Q9P1Z2 691 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms