RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SIAH1Q8IUQ4 282 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 TCP10LQ8TDR4 215 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 UPF1Q92900 1129 aaKnown RBP eCLIP14.88□□□□□ -0.03
LDB3-209ENST00000623056 NR1H4Q96RI1 486 aaPredicted RBP14.88□□□□□ -0.03
LDB3-209ENST00000623056 DDX50Q9BQ39 737 aaKnown RBP14.88□□□□□ -0.03
LDB3-209ENST00000623056 TMEM120AQ9BXJ8 343 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 DMAP1Q9NPF5 467 aaPredicted RBP14.88□□□□□ -0.03
LDB3-209ENST00000623056 LARSQ9P2J5 1176 aaKnown RBP14.88□□□□□ -0.03
LDB3-209ENST00000623056 POLLQ9UGP5 575 aa14.88□□□□□ -0.03
LDB3-209ENST00000623056 SERPINB2P05120 415 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 LYNP07948 512 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 ESRRAP11474 423 aaPredicted RBP14.87□□□□□ -0.03
LDB3-209ENST00000623056 AMPD1P23109 780 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 GEMIN4P57678 1058 aaKnown RBP14.87□□□□□ -0.03
LDB3-209ENST00000623056 NOP14P78316 857 aaKnown RBP14.87□□□□□ -0.03
LDB3-209ENST00000623056 ALCAMQ13740 583 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 KRT72Q14CN4 511 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 EFTUD2Q15029 972 aaKnown RBP eCLIP14.87□□□□□ -0.03
LDB3-209ENST00000623056 CBWD2Q8IUF1 395 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 OGFOD1Q8N543 542 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 TSSK1BQ9BXA7 367 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 KCNK13Q9HB14 408 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 ALG13Q9NP73 1137 aaKnown RBP14.87□□□□□ -0.03
LDB3-209ENST00000623056 DDX43Q9NXZ2 648 aaKnown RBP14.87□□□□□ -0.03
LDB3-209ENST00000623056 SLC17A7Q9P2U7 560 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 ZNF148Q9UQR1 794 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 A8MXQ7 604 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 BANF1O75531 89 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 RARBP10826 455 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 GPX6P59796 221 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 UBXN2AP68543 259 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 NFIAQ12857 509 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 PDIA2Q13087 525 aaKnown RBP14.87□□□□□ -0.03
LDB3-209ENST00000623056 MORF4L2Q15014 288 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 CDC42EP5Q6NZY7 148 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 CCDC62Q6P9F0 684 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 ANKMY2Q8IV38 441 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 ZFPM1Q8IX07 1006 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 EXD1Q8NHP7 514 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 TAS1R2Q8TE23 839 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 RBM41Q96IZ5 413 aaKnown RBP14.87□□□□□ -0.03
LDB3-209ENST00000623056 IWS1Q96ST2 819 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 VPS11Q9H270 941 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 TOPORSQ9NS56 1045 aaPredicted RBP14.87□□□□□ -0.03
LDB3-209ENST00000623056 KLHL11Q9NVR0 708 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 MTO1Q9Y2Z2 717 aaKnown RBP14.87□□□□□ -0.03
LDB3-209ENST00000623056 COQ4Q9Y3A0 265 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 MYPNQ86TC9 1320 aa14.87□□□□□ -0.03
LDB3-209ENST00000623056 SMCHD1A6NHR9 2005 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 GOLGA8RI6L899 631 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 CYP1A1P04798 512 aaPredicted RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 ZCCHC18P0CG32 403 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 MAPTP10636 758 aaKnown RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 PGM1P36871 562 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 SSR1P43307 286 aaKnown RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 SNRNP35Q16560 246 aaKnown RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 EAPPQ56P03 285 aaPredicted RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 FAM43BQ6ZT52 329 aaPredicted RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 RFX8Q6ZV50 586 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 CENPUQ71F23 418 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 TTC7BQ86TV6 843 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 ALLCQ8N6M5 410 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 RPGRQ92834 1020 aaKnown RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 TRIM11Q96F44 468 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 KLF6Q99612 283 aaPredicted RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 TMX4Q9H1E5 349 aaPredicted RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 RABGEF1Q9UJ41 708 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 USTQ9Y2C2 406 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 TM9SF1O15321 606 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 PIAS1O75925 651 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 NDUFB10O96000 172 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 PYGLP06737 847 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 KRT10P13645 584 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 SCNN1DP51172 638 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 CNPY1Q3B7I2 92 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 RNASEH2BQ5TBB1 312 aaKnown RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 KAZNQ674X7 775 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.86□□□□□ -0.03
LDB3-209ENST00000623056 FBXL13Q8NEE6 735 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 MZB1Q8WU39 189 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 ZNF577Q9BSK1 485 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 ASCC2Q9H1I8 757 aaPredicted RBP14.86□□□□□ -0.03
LDB3-209ENST00000623056 TMEM8AQ9HCN3 771 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 ARHGEF4Q9NR80 690 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 RAB20Q9NX57 234 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 ANGPTL2Q9UKU9 493 aa14.86□□□□□ -0.03
LDB3-209ENST00000623056 GOLGB1Q14789 3259 aaKnown RBP14.85□□□□□ -0.03
LDB3-209ENST00000623056 C2orf71A6NGG8 1288 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 CFBP00751 764 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 DLDP09622 509 aaKnown RBP14.85□□□□□ -0.03
LDB3-209ENST00000623056 ARP10275 920 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 PSMC4P43686 418 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 RAP1GDS1P52306 607 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 TFDP1Q14186 410 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 TBC1D10BQ4KMP7 808 aaPredicted RBP14.85□□□□□ -0.03
LDB3-209ENST00000623056 ZC3H12AQ5D1E8 599 aaKnown RBP14.85□□□□□ -0.03
LDB3-209ENST00000623056 RASIP1Q5U651 963 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 IZUMO2Q6UXV1 221 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 HAUS6Q7Z4H7 955 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 ARHGAP18Q8N392 663 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms