RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 DPYSL4O14531 572 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 FGF19O95750 216 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 CYP11A1P05108 521 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 KRT18P05783 430 aaKnown RBP25.76■■□□□ 1.71
CPSF1-214ENST00000622776 GABRR2P28476 465 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 SOX9P48436 509 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 ATXN1P54253 815 aaKnown RBP25.76■■□□□ 1.71
CPSF1-214ENST00000622776 TMEM132DQ14C87 1099 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 LPAL2Q16609 132 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 GPR158Q5T848 1215 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 ITIH5Q86UX2 942 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 SPEM1Q8N4L4 309 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 OR10T2Q8NGX3 314 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 FIZ1Q96SL8 496 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 ZHX3Q9H4I2 956 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 PARD6AQ9NPB6 346 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 DERAQ9Y315 318 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 SCN1AP35498 2009 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 ANO9A1A5B4 782 aa25.75■■□□□ 1.71
CPSF1-214ENST00000622776 PLCG1P19174 1290 aa25.75■■□□□ 1.71
CPSF1-214ENST00000622776 NMT1P30419 496 aaKnown RBP25.75■■□□□ 1.71
CPSF1-214ENST00000622776 GTF2BQ00403 316 aa25.75■■□□□ 1.71
CPSF1-214ENST00000622776 LRRC32Q14392 662 aa25.75■■□□□ 1.71
CPSF1-214ENST00000622776 ARHGAP29Q52LW3 1261 aa25.75■■□□□ 1.71
CPSF1-214ENST00000622776 ARHGAP15Q53QZ3 475 aa25.75■■□□□ 1.71
CPSF1-214ENST00000622776 RAD54LQ92698 747 aa25.75■■□□□ 1.71
CPSF1-214ENST00000622776 RBM12Q9NTZ6 932 aaKnown RBP25.75■■□□□ 1.71
CPSF1-214ENST00000622776 MYBPHLA2RUH7 354 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 ANKRD63C9JTQ0 380 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 TBCAO75347 108 aaKnown RBP25.74■■□□□ 1.71
CPSF1-214ENST00000622776 ABCD1P33897 745 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 TUFMP49411 452 aaKnown RBP25.74■■□□□ 1.71
CPSF1-214ENST00000622776 ACOT2P49753 483 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 KARSQ15046 597 aaKnown RBP25.74■■□□□ 1.71
CPSF1-214ENST00000622776 SLC39A12Q504Y0 691 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 LAIR1Q6GTX8 287 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 TXNDC11Q6PKC3 985 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 RALGPS2Q86X27 583 aaPredicted RBP25.74■■□□□ 1.71
CPSF1-214ENST00000622776 RASSF8Q8NHQ8 419 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 ZFYVE19Q96K21 471 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 ASB7Q9H672 318 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 OBP2AQ9NY56 170 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 CDV3Q9UKY7 258 aaKnown RBP25.74■■□□□ 1.71
CPSF1-214ENST00000622776 ANK1P16157 1881 aa25.74■■□□□ 1.71
CPSF1-214ENST00000622776 CNOT1A5YKK6 2376 aaKnown RBP25.74■■□□□ 1.71
CPSF1-214ENST00000622776 SPECC1L-ADORA2AF8WAN1 911 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 CTHP32929 405 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 LONP1P36776 959 aaKnown RBP25.73■■□□□ 1.71
CPSF1-214ENST00000622776 GRIN1Q05586 938 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 WDR44Q5JSH3 913 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 DGKKQ5KSL6 1271 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 PRR23BQ6ZRT6 265 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 TTC8Q8TAM2 541 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 FAM200AQ8TCP9 573 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 SEPT5Q99719 369 aaPredicted RBP25.73■■□□□ 1.71
CPSF1-214ENST00000622776 LPIN3Q9BQK8 851 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 ZCWPW1Q9H0M4 648 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 TASP1Q9H6P5 420 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 GTSE1Q9NYZ3 720 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 DSEQ9UL01 958 aa25.73■■□□□ 1.71
CPSF1-214ENST00000622776 CHURC1-FNTBB4DL54 471 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 CD2BP2O95400 341 aaKnown RBP25.72■■□□□ 1.71
CPSF1-214ENST00000622776 BMP15O95972 392 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 WEE1P30291 646 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 FNTBP49356 437 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 CDR1P51861 262 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 VEPH1Q14D04 833 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 MGAT5BQ3V5L5 792 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 ZC2HC1CQ53FD0 456 aaPredicted RBP25.72■■□□□ 1.71
CPSF1-214ENST00000622776 ADALQ6DHV7 355 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 SLFN12LQ6IEE8 588 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 Q6ZS52 159 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 METTL23Q86XA0 190 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 SMC3Q9UQE7 1217 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 C2CD2Q9Y426 696 aa25.72■■□□□ 1.71
CPSF1-214ENST00000622776 TISP43B9A030 160 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 CYB561D2O14569 222 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 PAPSS2O95340 614 aaPredicted RBP25.71■■□□□ 1.71
CPSF1-214ENST00000622776 PRAMEF12O95522 483 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 RETP07949 1114 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 ATF6P18850 670 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 CYP4F8P98187 520 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 DMWDQ09019 674 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 SPEM2Q0P670 501 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 SIM2Q14190 667 aaPredicted RBP25.71■■□□□ 1.71
CPSF1-214ENST00000622776 THEM5Q8N1Q8 247 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 BPIFB1Q8TDL5 484 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 LARP4BQ92615 738 aaKnown RBP25.71■■□□□ 1.71
CPSF1-214ENST00000622776 IL21Q9HBE4 155 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 DPP3Q9NY33 737 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 AGO2Q9UKV8 859 aaKnown RBP25.71■■□□□ 1.71
CPSF1-214ENST00000622776 STYXL1Q9Y6J8 313 aa25.71■■□□□ 1.71
CPSF1-214ENST00000622776 TSC2P49815 1807 aa25.7■■□□□ 1.71
CPSF1-214ENST00000622776 K7ESF4 209 aa25.7■■□□□ 1.7
CPSF1-214ENST00000622776 HRO43593 1189 aa25.7■■□□□ 1.7
CPSF1-214ENST00000622776 CDC25CP30307 473 aa25.7■■□□□ 1.7
CPSF1-214ENST00000622776 TAF6P49848 677 aa25.7■■□□□ 1.7
CPSF1-214ENST00000622776 PLCB2Q00722 1185 aa25.7■■□□□ 1.7
CPSF1-214ENST00000622776 LARP1BQ659C4 914 aaKnown RBP25.7■■□□□ 1.7
CPSF1-214ENST00000622776 GCNAQ96QF7 691 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms