RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 USP21Q9UK80 565 aa13.76□□□□□ -0.21
CHD1L-210ENST00000622533 PHF24Q9UPV7 400 aa13.76□□□□□ -0.21
CHD1L-210ENST00000622533 GYG2O15488 501 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 AMPD1P23109 780 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 RARRES1P49788 294 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 NCKAP1LP55160 1127 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 UBXN2AP68543 259 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 ZNF677Q86XU0 584 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 CCDC89Q8N998 374 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 FBXL13Q8NEE6 735 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 DENND1AQ8TEH3 1009 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 MCUR1Q96AQ8 359 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 DTNBP1Q96EV8 351 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 BTBD10Q9BSF8 475 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 DCLK3Q9C098 648 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 DBNDD1Q9H9R9 158 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 ANAPC7Q9UJX3 599 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.75□□□□□ -0.21
CHD1L-210ENST00000622533 A0A0G2JND7 137 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 KRT15P19012 456 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 CA4P22748 312 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 RXRBP28702 533 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 QARSP47897 775 aaKnown RBP13.75□□□□□ -0.21
CHD1L-210ENST00000622533 INHBCP55103 352 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 SNRNP35Q16560 246 aaKnown RBP13.75□□□□□ -0.21
CHD1L-210ENST00000622533 VPS52Q8N1B4 723 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 HELQQ8TDG4 1101 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 CSRNP1Q96S65 589 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 HERPUD2Q9BSE4 406 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 FAM192AQ9GZU8 254 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 C12orf65Q9H3J6 166 aaKnown RBP13.75□□□□□ -0.21
CHD1L-210ENST00000622533 KANSL3Q9P2N6 904 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 ZHX2Q9Y6X8 837 aa13.75□□□□□ -0.21
CHD1L-210ENST00000622533 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHD1L-210ENST00000622533 RRM1P23921 792 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 PDK4Q16654 411 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 CC2D2BQ6DHV5 1058 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 TRABD2AQ86V40 505 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 NCAPG2Q86XI2 1143 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.74□□□□□ -0.215e-6■□□□□ 10
CHD1L-210ENST00000622533 TMEM165Q9HC07 324 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 ALG13Q9NP73 1137 aaKnown RBP13.74□□□□□ -0.21
CHD1L-210ENST00000622533 ETNK2Q9NVF9 386 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 ATXN10Q9UBB4 475 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 LNPEPQ9UIQ6 1025 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 EXOC1LA0A1B0GW35 172 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 C2orf71A6NGG8 1288 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 ZSCAN9O15535 394 aaPredicted RBP13.74□□□□□ -0.21
CHD1L-210ENST00000622533 CCDC22O60826 627 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 ABHD2P08910 425 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 PIK3CAP42336 1068 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 ZRSR2Q15696 482 aaKnown RBP13.74□□□□□ -0.21
CHD1L-210ENST00000622533 MAPK6Q16659 721 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 AOC3Q16853 763 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 SLC45A4Q5BKX6 768 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 IZUMO2Q6UXV1 221 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 ZNF365Q70YC5 407 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 DDX1Q92499 740 aaKnown RBP13.74□□□□□ -0.21
CHD1L-210ENST00000622533 MASTLQ96GX5 879 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 VCX3BQ9H321 246 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 SYNCQ9H7C4 482 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 VCX3AQ9NNX9 186 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 FBXO6Q9NRD1 293 aaPredicted RBP13.74□□□□□ -0.21
CHD1L-210ENST00000622533 RHBDL2Q9NX52 303 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 RAB20Q9NX57 234 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 PCDHAC2Q9Y5I4 1007 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 A0A1W2PPM1 405 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 TISP43B9A030 160 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 FAM163BP0C2L3 166 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 GCAP28676 217 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 CPA2P48052 419 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 BPIFB4P59827 614 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 GCNT1Q02742 428 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 MEX3CQ5U5Q3 659 aaKnown RBP13.74□□□□□ -0.21
CHD1L-210ENST00000622533 PDCD7Q8N8D1 485 aaKnown RBP13.74□□□□□ -0.21
CHD1L-210ENST00000622533 ZNF75CPQ92670 426 aaPredicted RBP13.74□□□□□ -0.21
CHD1L-210ENST00000622533 KIAA1586Q9HCI6 787 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 EURLQ9NYK6 297 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 HEY2Q9UBP5 337 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 FEM1BQ9UK73 627 aa13.74□□□□□ -0.21
CHD1L-210ENST00000622533 SLX4Q8IY92 1834 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 A6NJR5 290 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 PSTPIP1O43586 416 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 PIAS1O75925 651 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 ADRB2P07550 413 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 HSD17B4P51659 736 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 USP46P62068 366 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 JAG1P78504 1218 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 DEUP1Q05D60 604 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 CCNG2Q16589 344 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 PPP1R2P3Q6NXS1 205 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 LARGE2Q8N3Y3 721 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 DHX38Q92620 1227 aaKnown RBP13.73□□□□□ -0.21
CHD1L-210ENST00000622533 SEMA4DQ92854 862 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 CYTH2Q99418 400 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 KCNH7Q9NS40 1196 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 TBC1D22BQ9NU19 505 aa13.73□□□□□ -0.21
CHD1L-210ENST00000622533 STX18Q9P2W9 335 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms