RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 HERC5Q9UII4 1024 aaKnown RBP7.9□□□□□ -1.15
TRIM49B-202ENST00000622138 PHTF1Q9UMS5 762 aa7.9□□□□□ -1.15
TRIM49B-202ENST00000622138 KIAA1024Q9UPX6 916 aa7.9□□□□□ -1.15
TRIM49B-202ENST00000622138 ATF5Q9Y2D1 282 aaPredicted RBP7.9□□□□□ -1.15
TRIM49B-202ENST00000622138 GREB1LQ9C091 1923 aaPredicted RBP7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 C15orf38-AP3S2A0A0A6YYH1 394 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 CCDC160A6NGH7 325 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 TTC34A8MYJ7 566 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 TMEM114B3SHH9 223 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP17L15C9J2P7 530 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP17L13C9JLJ4 530 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP17L11C9JVI0 530 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP17L18D6R9N7 530 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP17L22D6RA61 530 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP17L17D6RBQ6 530 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP17L19D6RCP7 530 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP17L20D6RJB6 530 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 PIK3CDO00329 1044 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 KIAA0391O15091 583 aaKnown RBP7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 GYG2O15488 501 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 BUD23O43709 281 aaKnown RBP7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 EDF1O60869 148 aaKnown RBP7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 TCEA3O75764 348 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 HAUS5O94927 633 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 CLPTM1O96005 669 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 ITGA4P13612 1032 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 KCNA2P16389 499 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 PLCG2P16885 1265 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 SHMT1P34896 483 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 RFC4P35249 363 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 HOXD13P35453 343 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 RPS3AP61247 264 aaKnown RBP7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 TUBA1BP68363 451 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP17L24Q0WX57 530 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 THOC5Q13769 683 aaKnown RBP7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 ASIC2Q16515 512 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 NADK2Q4G0N4 442 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 HYIQ5T013 277 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 TMCO4Q5TGY1 634 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 METTL21CQ5VZV1 264 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 SNRNP48Q6IEG0 339 aaKnown RBP7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 NIPAL1Q6NVV3 410 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 AAGABQ6PD74 315 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 FOXR2Q6PJQ5 311 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP17L6PQ6QN14 398 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 POTEGQ6S5H5 508 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 UGT2A3Q6UWM9 527 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 TUBA1AQ71U36 451 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 NLRP9Q7RTR0 991 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 ZNF571Q7Z3V5 609 aaPredicted RBP7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 ARPINQ7Z6K5 226 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 CLNKQ7Z7G1 428 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 RASSF3Q86WH2 238 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 JAMLQ86YT9 394 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 SLC7A5P1Q8MH63 180 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 VPS52Q8N1B4 723 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 DDHD1Q8NEL9 900 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 FBXO25Q8TCJ0 367 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 USP6NLQ92738 828 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 CEP63Q96MT8 703 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 SEMA4AQ9H3S1 761 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 GGA1Q9UJY5 639 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 DBR1Q9UK59 544 aaKnown RBP7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 FBXO9Q9UK97 447 aaPredicted RBP7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 PADI4Q9UM07 663 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 NOX1Q9Y5S8 564 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 LTBP1Q14766 1721 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 FRMPD4Q14CM0 1322 aa7.89□□□□□ -1.15
TRIM49B-202ENST00000622138 A0A0A6YYK5 440 aaPredicted RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 MTRF1O75570 445 aaKnown RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 CIB2O75838 187 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 TFAP2AP05549 437 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 MYCLP1P12525 358 aaPredicted RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 HSPA6P17066 643 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 SLC9A1P19634 815 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 HOXD10P28358 340 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 RXRGP48443 463 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PLTPP55058 493 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 MARSP56192 900 aaKnown RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PSMC6P62333 389 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 IRX4P78413 519 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 KCNC4Q03721 635 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PTK2Q05397 1052 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 KLHL30Q0D2K2 578 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 MAPK7Q13164 816 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 KRT81Q14533 505 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PDK3Q15120 406 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 TGFBIQ15582 683 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 ZNF568Q3ZCX4 644 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 HERC4Q5GLZ8 1057 aaPredicted RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 FAM209AQ5JX71 171 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 FAM91A1Q658Y4 838 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 RWDD4Q6NW29 188 aaKnown RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PPP1R18Q6NYC8 613 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 SLFN11Q7Z7L1 901 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 CERS5Q8N5B7 392 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 C7orf43Q8WVR3 580 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 OSBPL6Q9BZF3 934 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 TRIM31Q9BZY9 425 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms