RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 PYM1Q9BRP8 204 aaKnown RBP10.09□□□□□ -0.79
TARDBP-227ENST00000622057 FAM126AQ9BYI3 521 aaPredicted RBP10.09□□□□□ -0.79
TARDBP-227ENST00000622057 IKZF4Q9H2S9 585 aa10.09□□□□□ -0.79
TARDBP-227ENST00000622057 ASB7Q9H672 318 aa10.09□□□□□ -0.79
TARDBP-227ENST00000622057 C8orf33Q9H7E9 229 aaPredicted RBP10.09□□□□□ -0.79
TARDBP-227ENST00000622057 PRMT8Q9NR22 394 aaPredicted RBP10.09□□□□□ -0.79
TARDBP-227ENST00000622057 RBM12Q9NTZ6 932 aaKnown RBP10.09□□□□□ -0.79
TARDBP-227ENST00000622057 AGO2Q9UKV8 859 aaKnown RBP10.09□□□□□ -0.79
TARDBP-227ENST00000622057 USP18Q9UMW8 372 aa10.09□□□□□ -0.79
TARDBP-227ENST00000622057 SMG5Q9UPR3 1016 aaKnown RBP10.09□□□□□ -0.79
TARDBP-227ENST00000622057 ANO9A1A5B4 782 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 VPS37CA5D8V6 355 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-227ENST00000622057 PAX3P23760 479 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 ABCD1P33897 745 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 TAF6P49848 677 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 CYP4F8P98187 520 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 SATB1Q01826 763 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 GAS6Q14393 721 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 VEPH1Q14D04 833 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 PRR23BQ6ZRT6 265 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 ZNF720Q7Z2F6 126 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 BRAPQ7Z569 592 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 LRRTM3Q86VH5 581 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 GPR161Q8N6U8 529 aaKnown RBP10.08□□□□□ -0.8
TARDBP-227ENST00000622057 POMGNT1Q8WZA1 660 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 LRRC3BQ96PB8 259 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 MKNK1Q9BUB5 465 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 ZCWPW1Q9H0M4 648 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 EPC1Q9H2F5 836 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 DPP3Q9NY33 737 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 DLL3Q9NYJ7 618 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 GTSE1Q9NYZ3 720 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 TBC1D7Q9P0N9 293 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 CCDC39Q9UFE4 941 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 GMEB2Q9UKD1 530 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 DSEQ9UL01 958 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 RAB23Q9ULC3 237 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 DERAQ9Y315 318 aa10.08□□□□□ -0.8
TARDBP-227ENST00000622057 ARNTLO00327 626 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 FGF19O95750 216 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 CYP11A1P05108 521 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 ATXN1P54253 815 aaKnown RBP10.07□□□□□ -0.8
TARDBP-227ENST00000622057 MLLT6P55198 1093 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-227ENST00000622057 FCHO2Q0JRZ9 810 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 LRRC32Q14392 662 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 POSTNQ15063 836 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 ARHGAP29Q52LW3 1261 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 WSCD1Q658N2 575 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 C1orf228Q6PIY5 440 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 TXNDC11Q6PKC3 985 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 USP49Q70CQ1 688 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 SFR1Q86XK3 245 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 CELF5Q8N6W0 485 aaKnown RBP10.07□□□□□ -0.8
TARDBP-227ENST00000622057 BPIFB1Q8TDL5 484 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 GCNAQ96QF7 691 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 IER2Q9BTL4 223 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 SMG9Q9H0W8 520 aaKnown RBP10.07□□□□□ -0.8
TARDBP-227ENST00000622057 TASP1Q9H6P5 420 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 MRPL44Q9H9J2 332 aaKnown RBP10.07□□□□□ -0.8
TARDBP-227ENST00000622057 ABI2Q9NYB9 513 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-227ENST00000622057 C2CD2Q9Y426 696 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 CLIC4Q9Y696 253 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 STYXL1Q9Y6J8 313 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 CITO14578 2027 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 DCHS1Q96JQ0 3298 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 MIA3Q5JRA6 1907 aa10.07□□□□□ -0.8
TARDBP-227ENST00000622057 MYBPHLA2RUH7 354 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 KPNA7A9QM74 516 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 CHURC1-FNTBB4DL54 471 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 SPECC1L-ADORA2AF8WAN1 911 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 HRO43593 1189 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 PRPF40AO75400 957 aaKnown RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 HAPLN1P10915 354 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 TDGF1P13385 188 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 ATF6P18850 670 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 SDHBP21912 280 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 CDC25CP30307 473 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 FNTBP49356 437 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 CEBPZQ03701 1054 aaKnown RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 TNK2Q07912 1038 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 DMWDQ09019 674 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 KCNA1Q09470 495 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 SPEM2Q0P670 501 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 SIM2Q14190 667 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 PON2Q15165 354 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 RRAGBQ5VZM2 374 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 HEATR6Q6AI08 1181 aaKnown RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 CRELD2Q6UXH1 353 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 SV2BQ7L1I2 683 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 RALGPS2Q86X27 583 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 EFCAB13Q8IY85 973 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 DCP1BQ8IZD4 617 aaKnown RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 SPEM1Q8N4L4 309 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 SPPL2BQ8TCT7 592 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 NOC3LQ8WTT2 800 aaKnown RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 MSANTD3Q96H12 275 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 CLIC6Q96NY7 704 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 FAM213AQ9BRX8 229 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms