RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	PREB	Q9HCU5	417 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	ZNF148	Q9UQR1	794 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	MYH11	P35749	1972 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	GCA	P28676	217 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	PGM1	P36871	562 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	NSF	P46459	744 aa	Known RBP	15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	NOP14	P78316	857 aa	Known RBP	15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	PLCB3	Q01970	1234 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	AP1B1	Q10567	949 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	C1orf220	Q5T0J3	134 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	BBOF1	Q8ND07	529 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	ACER1	Q8TDN7	264 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	OPTN	Q96CV9	577 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	NSL1	Q96IY1	281 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	CLPTM1L	Q96KA5	538 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	FAM210A	Q96ND0	272 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	RAB20	Q9NX57	234 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	ZHX2	Q9Y6X8	837 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	NHS	Q6T4R5	1651 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	MAGEB2	O15479	319 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	OPHN1	O60890	802 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	ETS1	P14921	441 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	SSTR3	P32745	418 aa	Predicted RBP	15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	JAG1	P78504	1218 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	NR1H3	Q13133	447 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	CTC1	Q2NKJ3	1217 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	GLIS1	Q8NBF1	620 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	PTPRN2	Q92932	1015 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	IWS1	Q96ST2	819 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	KIFC3	Q9BVG8	833 aa		15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	DMAP1	Q9NPF5	467 aa	Predicted RBP	15.17	■□□□□ 0.02
SYNRG-231	ENST00000622045	C2CD2L	O14523	706 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	TATDN1	Q6P1N9	297 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	CFAP61	Q8NHU2	1237 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	POMGNT1	Q8WZA1	660 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	RHBDL2	Q9NX52	303 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	TAS2R1	Q9NYW7	299 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	PDP2	Q9P2J9	529 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	TRAFD1	O14545	582 aa	Predicted RBP	15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	SORBS3	O60504	671 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	TCEA3	O75764	348 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	CD58	P19256	250 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	MUT	P22033	750 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	DEUP1	Q05D60	604 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	EFTUD2	Q15029	972 aa	Known RBP eCLIP	15.16	■□□□□ 0.02	6e-7	■■■■■ 29.5
SYNRG-231	ENST00000622045	XKR9	Q5GH70	373 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	FAM84A	Q96KN4	292 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	CFAP57	Q96MR6	1250 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	CDK5RAP2	Q96SN8	1893 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	CHCHD3	Q9NX63	227 aa	Known RBP	15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	ANKFY1	Q9P2R3	1169 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	EXOC7	Q9UPT5	735 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	ATF7	P17544	494 aa	Predicted RBP	15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	USP37	Q86T82	979 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	PASD1	Q8IV76	773 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	CHURC1	Q8WUH1	139 aa		15.16	■□□□□ 0.02
SYNRG-231	ENST00000622045	COL16A1	Q07092	1604 aa	Predicted RBP	15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045		A6NJR5	290 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	RARRES1	P49788	294 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	ARFIP2	P53365	341 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	ZBED8	Q8IZ13	594 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	OSBPL8	Q9BZF1	889 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	TLE6	Q9H808	572 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	KCNH7	Q9NS40	1196 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	ACTL7B	Q9Y614	415 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	MROH7	Q68CQ1	1323 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	COL5A3	P25940	1745 aa	Predicted RBP	15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	IFNB1	P01574	187 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	QARS	P47897	775 aa	Known RBP	15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	CLEC16A	Q2KHT3	1053 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	CCDC62	Q6P9F0	684 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	FBXO27	Q8NI29	283 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	SLCO2A1	Q92959	643 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	HAUS1	Q96CS2	278 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	C11orf70	Q9BRQ4	267 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	FHDC1	Q9C0D6	1143 aa	Predicted RBP	15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	VCX3B	Q9H321	246 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	VCX3A	Q9NNX9	186 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	ETNK2	Q9NVF9	386 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	NEU2	Q9Y3R4	380 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	KLHL23	Q8NBE8	558 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	NMD3	Q96D46	503 aa	Known RBP	15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	MXRA8	Q9BRK3	442 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	SPATA16	Q9BXB7	569 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	ASCC2	Q9H1I8	757 aa	Predicted RBP	15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	SAR1A	Q9NR31	198 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	GALNT8	Q9NY28	637 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	EURL	Q9NYK6	297 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	SLC17A7	Q9P2U7	560 aa		15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	STX18	Q9P2W9	335 aa	Known RBP	15.15	■□□□□ 0.02
SYNRG-231	ENST00000622045	PI4K2B	G5E9Z4	385 aa		15.14	■□□□□ 0.01
SYNRG-231	ENST00000622045	ZWINT	O95229	277 aa		15.14	■□□□□ 0.01
SYNRG-231	ENST00000622045	VIL1	P09327	827 aa	Known RBP	15.14	■□□□□ 0.01
SYNRG-231	ENST00000622045	POTEJ	P0CG39	1038 aa		15.14	■□□□□ 0.01
SYNRG-231	ENST00000622045	ADRA2B	P18089	450 aa		15.14	■□□□□ 0.01
SYNRG-231	ENST00000622045	MTMR2	Q13614	643 aa		15.14	■□□□□ 0.01
SYNRG-231	ENST00000622045	LIN9	Q5TKA1	542 aa		15.14	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms