RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ZNF572Q7Z3I7 529 aaPredicted RBP22.82■■□□□ 1.24
SPAST-204ENST00000621856 C1orf131Q8NDD1 294 aaKnown RBP22.82■■□□□ 1.24
SPAST-204ENST00000621856 SH3TC2Q8TF17 1288 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 ZNF560Q96MR9 790 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 TWNKQ96RR1 684 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.82■■□□□ 1.24
SPAST-204ENST00000621856 STARD7Q9NQZ5 370 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 PADI3Q9ULW8 664 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 ALG6Q9Y672 507 aa22.82■■□□□ 1.24
SPAST-204ENST00000621856 NDST1P52848 882 aa22.81■■□□□ 1.24
SPAST-204ENST00000621856 INCA1Q0VD86 236 aa22.81■■□□□ 1.24
SPAST-204ENST00000621856 BTBD6Q96KE9 485 aa22.81■■□□□ 1.24
SPAST-204ENST00000621856 ZNF518BQ9C0D4 1074 aa22.81■■□□□ 1.24
SPAST-204ENST00000621856 KBTBD13C9JR72 458 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 CEP104O60308 925 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 RHOXF2BP0C7M4 288 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 CYP3A5P20815 502 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 LPIN1Q14693 890 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 FAM26DQ5JW98 314 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 DENND1BQ6P3S1 775 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 RHOXF2Q9BQY4 288 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 BEGAINQ9BUH8 593 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 OSBPL7Q9BZF2 842 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 ANAPC7Q9UJX3 599 aa22.8■■□□□ 1.24
SPAST-204ENST00000621856 A0A0U1RQG5 324 aaPredicted RBP22.79■■□□□ 1.24
SPAST-204ENST00000621856 PNPLA4P41247 253 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 ZNF618Q5T7W0 954 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 LLGL2Q6P1M3 1020 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 SPATA4Q8NEY3 305 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 HEXIM2Q96MH2 286 aaKnown RBP22.79■■□□□ 1.24
SPAST-204ENST00000621856 RPS6KC1Q96S38 1066 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 TRPV6Q9H1D0 765 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 GOLGA2P5Q9HBQ8 144 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 PCNTO95613 3336 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 PIRO00625 290 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 DDX3YO15523 660 aaKnown RBP22.79■■□□□ 1.24
SPAST-204ENST00000621856 CAND2O75155 1236 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 CALB1P05937 261 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 VDRP11473 427 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 COMTP21964 271 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 MMP8P22894 467 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 CDH5P33151 784 aaPredicted RBP22.79■■□□□ 1.24
SPAST-204ENST00000621856 SOX4Q06945 474 aaPredicted RBP22.79■■□□□ 1.24
SPAST-204ENST00000621856 PTP4A2Q12974 167 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 ZFP42Q96MM3 310 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 NT5C1AQ9BXI3 368 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 MRPL47Q9HD33 250 aaKnown RBP22.79■■□□□ 1.24
SPAST-204ENST00000621856 SCINQ9Y6U3 715 aa22.79■■□□□ 1.24
SPAST-204ENST00000621856 MIF4GDA9UHW6 222 aaKnown RBP22.78■■□□□ 1.24
SPAST-204ENST00000621856 PTGESO14684 152 aa22.78■■□□□ 1.24
SPAST-204ENST00000621856 SPOPO43791 374 aa22.78■■□□□ 1.24
SPAST-204ENST00000621856 RNASE9P60153 205 aaKnown RBP22.78■■□□□ 1.24
SPAST-204ENST00000621856 ITIH3Q06033 890 aa22.78■■□□□ 1.24
SPAST-204ENST00000621856 SGO2Q562F6 1265 aa22.78■■□□□ 1.24
SPAST-204ENST00000621856 DPH6Q7L8W6 267 aa22.78■■□□□ 1.24
SPAST-204ENST00000621856 ERICH1Q86X53 443 aa22.78■■□□□ 1.24
SPAST-204ENST00000621856 UBL4BQ8N7F7 174 aa22.78■■□□□ 1.24
SPAST-204ENST00000621856 LPPQ93052 612 aa22.78■■□□□ 1.24
SPAST-204ENST00000621856 MRPL45Q9BRJ2 306 aaKnown RBP22.78■■□□□ 1.24
SPAST-204ENST00000621856 LHX5Q9H2C1 402 aa22.78■■□□□ 1.24
SPAST-204ENST00000621856 RNF216Q9NWF9 866 aaPredicted RBP22.78■■□□□ 1.24
SPAST-204ENST00000621856 PHF24Q9UPV7 400 aa22.78■■□□□ 1.24
SPAST-204ENST00000621856 MEIS3P2A8K0S8 358 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 IBSPP21815 317 aaPredicted RBP22.77■■□□□ 1.24
SPAST-204ENST00000621856 MLH1P40692 756 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 TAF6P49848 677 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 RAB27AP51159 221 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 SV2CQ496J9 727 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 FBXO38Q6PIJ6 1188 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 PDCL2Q8N4E4 241 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 USP38Q8NB14 1042 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 PPP1R10Q96QC0 940 aaKnown RBP22.77■■□□□ 1.24
SPAST-204ENST00000621856 PARD6BQ9BYG5 372 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 ANKZF1Q9H8Y5 726 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 SLC38A7Q9NVC3 462 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 ARGLU1Q9NWB6 273 aaPredicted RBP22.77■■□□□ 1.24
SPAST-204ENST00000621856 CENPFP49454 3210 aa22.77■■□□□ 1.24
SPAST-204ENST00000621856 MGEA5O60502 916 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 MICAL2O94851 1124 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 CKBP12277 381 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 PLEKHA7Q6IQ23 1121 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 CCDC70Q6NSX1 233 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 WDTC1Q8N5D0 677 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 SLC43A3Q8NBI5 491 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 UBE2Q2Q8WVN8 375 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 GAD1Q99259 594 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 UNC93B1Q9H1C4 597 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 WNT8AQ9H1J5 351 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 PARVAQ9NVD7 372 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 KIAA1257Q9ULG3 409 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 GIT1Q9Y2X7 761 aa22.77■■□□□ 1.23
SPAST-204ENST00000621856 KPNA7A9QM74 516 aa22.76■■□□□ 1.23
SPAST-204ENST00000621856 M0QYV0 167 aa22.76■■□□□ 1.23
SPAST-204ENST00000621856 ARVCFO00192 962 aa22.76■■□□□ 1.23
SPAST-204ENST00000621856 DSC3Q14574 896 aa22.76■■□□□ 1.23
SPAST-204ENST00000621856 MRPL10Q7Z7H8 261 aaKnown RBP22.76■■□□□ 1.23
SPAST-204ENST00000621856 MMGT1Q8N4V1 131 aa22.76■■□□□ 1.23
SPAST-204ENST00000621856 RNF169Q8NCN4 708 aa22.76■■□□□ 1.23
SPAST-204ENST00000621856 MSANTD4Q8NCY6 345 aa22.76■■□□□ 1.23
SPAST-204ENST00000621856 OR6B3Q8NGW1 331 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms