RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 ITGB3P05106 788 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 DCNP07585 359 aaKnown RBP22.12■■□□□ 1.13
SMC6-210ENST00000621152 CASP1P29466 404 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 HOXD13P35453 343 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 PNPLA4P41247 253 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 TEAD2Q15562 447 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 RESP18Q5W5W9 173 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 SCARA3Q6AZY7 606 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 LRRTM3Q86VH5 581 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 TTC9BQ8N6N2 239 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 C1orf127Q8N9H9 656 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 ZNF507Q8TCN5 953 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 FAM84AQ96KN4 292 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 LRRC3Q9BY71 257 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 BLZF1Q9H2G9 400 aa22.12■■□□□ 1.13
SMC6-210ENST00000621152 ZNF233A6NK53 670 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 KRT19P08727 400 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 AFMP43652 599 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 TUFMP49411 452 aaKnown RBP22.11■■□□□ 1.13
SMC6-210ENST00000621152 RBP5P82980 135 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 MLF2Q15773 248 aaPredicted RBP22.11■■□□□ 1.13
SMC6-210ENST00000621152 FAM26FQ5R3K3 315 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 UNC13DQ70J99 1090 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 FAM200AQ8TCP9 573 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 SMARCD2Q92925 531 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 ASB16Q96NS5 453 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 FOXQ1Q9C009 403 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 GPR88Q9GZN0 384 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 MAGEF1Q9HAY2 307 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 HSFX1Q9UBD0 423 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 ASB3Q9Y575 518 aa22.11■■□□□ 1.13
SMC6-210ENST00000621152 EIF3DO15371 548 aaKnown RBP eCLIP22.1■■□□□ 1.13
SMC6-210ENST00000621152 FCARP24071 287 aa22.1■■□□□ 1.13
SMC6-210ENST00000621152 PRKCQQ04759 706 aa22.1■■□□□ 1.13
SMC6-210ENST00000621152 MGAT5BQ3V5L5 792 aa22.1■■□□□ 1.13
SMC6-210ENST00000621152 EPM2AIP1Q7L775 607 aaPredicted RBP22.1■■□□□ 1.13
SMC6-210ENST00000621152 DCP1BQ8IZD4 617 aaKnown RBP22.1■■□□□ 1.13
SMC6-210ENST00000621152 SHKBP1Q8TBC3 707 aa22.1■■□□□ 1.13
SMC6-210ENST00000621152 SEPT5Q99719 369 aaPredicted RBP22.1■■□□□ 1.13
SMC6-210ENST00000621152 TRMT61BQ9BVS5 477 aaKnown RBP22.1■■□□□ 1.13
SMC6-210ENST00000621152 HSPBP1Q9NZL4 362 aa22.1■■□□□ 1.13
SMC6-210ENST00000621152 R3HCC1Q9Y3T6 440 aaKnown RBP22.1■■□□□ 1.13
SMC6-210ENST00000621152 A0A1W2PRU2 124 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 KANSL1LA0AUZ9 987 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 HUS1O60921 280 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 TMEM191BP0C7N4 346 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 VIPR2P41587 438 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 BFSP1Q12934 665 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 GRM2Q14416 872 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 ANGPT1Q15389 498 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 SURF1Q15526 300 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 LMBRD2Q68DH5 695 aaPredicted RBP22.09■■□□□ 1.13
SMC6-210ENST00000621152 ITIH5Q86UX2 942 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 TMC8Q8IU68 726 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 CBWD2Q8IUF1 395 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 RDH13Q8NBN7 331 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 ZSCAN18Q8TBC5 510 aaPredicted RBP22.09■■□□□ 1.13
SMC6-210ENST00000621152 SLITRK6Q9H5Y7 841 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 KIAA1586Q9HCI6 787 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 INTS13Q9NVM9 706 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 ITGA11Q9UKX5 1188 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 ANK1P16157 1881 aa22.09■■□□□ 1.13
SMC6-210ENST00000621152 PVALEFA0A1B0GWK0 134 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 CLIC2O15247 247 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 TGFB1I1O43294 461 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 LRRN2O75325 713 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 CD72P21854 359 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 SMARCB1Q12824 385 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 CUL4BQ13620 913 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 GPIHBP1Q8IV16 184 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 NELFCDQ8IXH7 590 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 CEP57L1Q8IYX8 460 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 PDCL2Q8N4E4 241 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 LRRC52Q8N7C0 313 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 PJA1Q8NG27 643 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 CXorf38Q8TB03 319 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 C2orf15Q8WU43 125 aaKnown RBP22.08■■□□□ 1.13
SMC6-210ENST00000621152 SCFD1Q8WVM8 642 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 PSMG2Q969U7 264 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 ANKRD36BP1Q96IX9 119 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 DDX23Q9BUQ8 820 aaKnown RBP22.08■■□□□ 1.13
SMC6-210ENST00000621152 MTMR12Q9C0I1 747 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 ATXN3LQ9H3M9 355 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 BRD9Q9H8M2 597 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 ZNF334Q9HCZ1 680 aaPredicted RBP22.08■■□□□ 1.13
SMC6-210ENST00000621152 SLC39A2Q9NP94 309 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 SERTAD1Q9UHV2 236 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 SIX4Q9UIU6 781 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 MTF2Q9Y483 593 aaPredicted RBP22.08■■□□□ 1.13
SMC6-210ENST00000621152 SNX9Q9Y5X1 595 aa22.08■■□□□ 1.13
SMC6-210ENST00000621152 SCN1AP35498 2009 aa22.07■■□□□ 1.12
SMC6-210ENST00000621152 FAM170BA6NMN3 283 aa22.07■■□□□ 1.12
SMC6-210ENST00000621152 HAPLN1P10915 354 aaPredicted RBP22.07■■□□□ 1.12
SMC6-210ENST00000621152 EHHADHQ08426 723 aa22.07■■□□□ 1.12
SMC6-210ENST00000621152 UBXN2BQ14CS0 331 aa22.07■■□□□ 1.12
SMC6-210ENST00000621152 TAF12Q16514 161 aa22.07■■□□□ 1.12
SMC6-210ENST00000621152 DUOXA2Q1HG44 320 aa22.07■■□□□ 1.12
SMC6-210ENST00000621152 VITQ6UXI7 678 aa22.07■■□□□ 1.12
SMC6-210ENST00000621152 GRAMD1CQ8IYS0 662 aa22.07■■□□□ 1.12
SMC6-210ENST00000621152 OR5B17Q8NGF7 314 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms