RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 FUT4P22083 530 aa13.1□□□□□ -0.31
SYNRG-229ENST00000621136 ABL2P42684 1182 aa13.1□□□□□ -0.31
SYNRG-229ENST00000621136 SLC25A3Q00325 362 aa13.1□□□□□ -0.31
SYNRG-229ENST00000621136 LBRQ14739 615 aaKnown RBP13.1□□□□□ -0.31
SYNRG-229ENST00000621136 NEDD8Q15843 81 aa13.1□□□□□ -0.31
SYNRG-229ENST00000621136 CYP4X1Q8N118 509 aa13.1□□□□□ -0.31
SYNRG-229ENST00000621136 USP13Q92995 863 aaPredicted RBP13.1□□□□□ -0.31
SYNRG-229ENST00000621136 ACSF2Q96CM8 615 aaPredicted RBP13.1□□□□□ -0.31
SYNRG-229ENST00000621136 UPF3AQ9H1J1 476 aaKnown RBP13.1□□□□□ -0.31
SYNRG-229ENST00000621136 C12orf65Q9H3J6 166 aaKnown RBP13.1□□□□□ -0.31
SYNRG-229ENST00000621136 CCDC134Q9H6E4 229 aa13.1□□□□□ -0.31
SYNRG-229ENST00000621136 STK17AQ9UEE5 414 aa13.1□□□□□ -0.31
SYNRG-229ENST00000621136 TIAM2Q8IVF5 1701 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 PIK3R2O00459 728 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 SLC37A4O43826 429 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 ZMPSTE24O75844 475 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 CFBP00751 764 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 FGFR3P22607 806 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 ARL4CP56559 192 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 CDCA2Q69YH5 1023 aaPredicted RBP13.09□□□□□ -0.31
SYNRG-229ENST00000621136 IL31Q6EBC2 164 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 CKAP2Q8WWK9 683 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 NACA2Q9H009 215 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 PSTPIP2Q9H939 334 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 SH3GLB2Q9NR46 395 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 UBE4BO95155 1302 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 MYO3BQ8WXR4 1341 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 FER1L4A9Z1Z3 1794 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 TTLL13PA6NNM8 815 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 SPTLC1O15269 473 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 ESRRBO95718 433 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 HABP4Q5JVS0 413 aaKnown RBP13.09□□□□□ -0.31
SYNRG-229ENST00000621136 LRRC8EQ6NSJ5 796 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 DARS2Q6PI48 645 aaKnown RBP13.09□□□□□ -0.31
SYNRG-229ENST00000621136 DEFB107AQ8IZN7 70 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 ASAP3Q8TDY4 903 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 EDEM3Q9BZQ6 932 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 SEMA6AQ9H2E6 1030 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 C1orf167Q5SNV9 1468 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 PAEPP09466 180 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
SYNRG-229ENST00000621136 ANPEPP15144 967 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 TRAF2Q12933 501 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 EFHC1Q5JVL4 640 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 POTEGQ6S5H5 508 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 RIPOR1Q6ZS17 1223 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 PRUNE1Q86TP1 453 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 OR6Y1Q8NGX8 325 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 ZNF317Q96PQ6 595 aaPredicted RBP13.09□□□□□ -0.31
SYNRG-229ENST00000621136 SPATA16Q9BXB7 569 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
SYNRG-229ENST00000621136 PRELID1Q9Y255 219 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 ITIH2P19823 946 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 ATP2B4P23634 1241 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 STAT3P40763 770 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 NUDT2P50583 147 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 DEPDC1BQ8WUY9 529 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 ZNF212Q9UDV6 495 aa13.09□□□□□ -0.31
SYNRG-229ENST00000621136 DIS3Q9Y2L1 958 aaKnown RBP13.09□□□□□ -0.31
SYNRG-229ENST00000621136 ARHGEF37A1IGU5 675 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 DDX3XO00571 662 aaKnown RBP eCLIP13.08□□□□□ -0.32
SYNRG-229ENST00000621136 SORBS3O60504 671 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 OR6B1O95007 311 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 MAGP20916 626 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.32
SYNRG-229ENST00000621136 NCKAP1LP55160 1127 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 MAP3K7CLP57077 242 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 UBE3AQ05086 875 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 TRIM25Q14258 630 aaKnown RBP13.08□□□□□ -0.32
SYNRG-229ENST00000621136 HIF1AQ16665 826 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 ZNF354CQ86Y25 554 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 HPS1Q92902 700 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 MAGEA8P43361 318 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 MMP13P45452 471 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 BPIFB4P59827 614 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 RALGDSQ12967 914 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 EXOC7Q9UPT5 735 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 FAM58BPP0C7Q3 252 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 ECE1P42892 770 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 BNIPLQ7Z465 357 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 ATL2Q8NHH9 583 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 RAD54LQ92698 747 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 SDCCAG3Q96C92 435 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 NSUN4Q96CB9 384 aaKnown RBP13.08□□□□□ -0.32
SYNRG-229ENST00000621136 EYA3Q99504 573 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 BEGAINQ9BUH8 593 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 LIN28AQ9H9Z2 209 aaKnown RBP13.08□□□□□ -0.32
SYNRG-229ENST00000621136 PSMC3IPQ9P2W1 217 aaPredicted RBP13.08□□□□□ -0.32
SYNRG-229ENST00000621136 BLOC1S6Q9UL45 172 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 SLC12A4Q9UP95 1085 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 GNPATO15228 680 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 CYP26A1O43174 497 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 LDHCP07864 332 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 CHN2P52757 468 aa13.08□□□□□ -0.32
SYNRG-229ENST00000621136 COPAP53621 1224 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms