RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 TMPRSS9Q7Z410 1059 aa6.55□□□□□ -1.36
VPS29-212ENST00000621131 CLNKQ7Z7G1 428 aa6.55□□□□□ -1.36
VPS29-212ENST00000621131 ACTRT2Q8TDY3 377 aa6.55□□□□□ -1.36
VPS29-212ENST00000621131 MTMR8Q96EF0 704 aa6.55□□□□□ -1.36
VPS29-212ENST00000621131 PACSIN1Q9BY11 444 aa6.55□□□□□ -1.36
VPS29-212ENST00000621131 SLC13A1Q9BZW2 595 aa6.55□□□□□ -1.36
VPS29-212ENST00000621131 CDYLQ9Y232 598 aa6.55□□□□□ -1.36
VPS29-212ENST00000621131 NEU2Q9Y3R4 380 aa6.55□□□□□ -1.36
VPS29-212ENST00000621131 CLSPNQ9HAW4 1339 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 SETD5Q9C0A6 1442 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 ALG1L2C9J202 215 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 PROM1O43490 865 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 PEX1O43933 1283 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 SUN1O94901 812 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 MATN4O95460 622 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 ZNF37AP17032 561 aaPredicted RBP6.54□□□□□ -1.36
VPS29-212ENST00000621131 IL12RB1P42701 662 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 ADKP55263 362 aaKnown RBP6.54□□□□□ -1.36
VPS29-212ENST00000621131 RPS7P62081 194 aaKnown RBP6.54□□□□□ -1.36
VPS29-212ENST00000621131 ZNF844Q08AG5 666 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 KHDC1Q4VXA5 237 aaKnown RBP6.54□□□□□ -1.36
VPS29-212ENST00000621131 EFCAB2Q5VUJ9 269 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 GADL1Q6ZQY3 521 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 CFAP52Q8N1V2 620 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 NSUN7Q8NE18 718 aaKnown RBP6.54□□□□□ -1.36
VPS29-212ENST00000621131 TMIEQ8NEW7 156 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 NELL1Q92832 810 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 KIAA1586Q9HCI6 787 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 INTS13Q9NVM9 706 aa6.54□□□□□ -1.36
VPS29-212ENST00000621131 CFAP20Q9Y6A4 193 aaKnown RBP6.54□□□□□ -1.36
VPS29-212ENST00000621131 UHRF1BP1LA0JNW5 1464 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 IQSEC2Q5JU85 1478 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 GCC2Q8IWJ2 1684 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 YY2O15391 372 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 MALP21145 153 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 POU6F2P78424 691 aaPredicted RBP6.53□□□□□ -1.36
VPS29-212ENST00000621131 SNAPC2Q13487 334 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 PTPN21Q16825 1174 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
VPS29-212ENST00000621131 TTC7BQ86TV6 843 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 PDPRQ8NCN5 879 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 SLC17A8Q8NDX2 589 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 SLC30A5Q8TAD4 765 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 TMEM125Q96AQ2 219 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 VRK1Q99986 396 aaPredicted RBP6.53□□□□□ -1.36
VPS29-212ENST00000621131 IMPG2Q9BZV3 1241 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 ADARB2Q9NS39 739 aaKnown RBP6.53□□□□□ -1.36
VPS29-212ENST00000621131 DNMT1P26358 1616 aaKnown RBP6.53□□□□□ -1.36
VPS29-212ENST00000621131 ZCCHC11Q5TAX3 1644 aaKnown RBP6.53□□□□□ -1.36
VPS29-212ENST00000621131 MADDQ8WXG6 1647 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 BCORL1Q5H9F3 1711 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 ATP10BO94823 1461 aa6.53□□□□□ -1.36
VPS29-212ENST00000621131 ADGBQ8N7X0 1667 aa6.52□□□□□ -1.37
VPS29-212ENST00000621131 SETD1BQ9UPS6 1966 aaKnown RBP6.52□□□□□ -1.37
VPS29-212ENST00000621131 CCDC195A0A1B0GUA6 201 aa6.52□□□□□ -1.37
VPS29-212ENST00000621131 NT5C1B-RDH14C9J2C7 533 aa6.52□□□□□ -1.37
VPS29-212ENST00000621131 F2RL2O00254 374 aa6.52□□□□□ -1.37
VPS29-212ENST00000621131 MPPED1O15442 326 aa6.52□□□□□ -1.37
VPS29-212ENST00000621131 ZRANB2O95218 330 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS29-212ENST00000621131 ANXA1P04083 346 aa6.52□□□□□ -1.37
VPS29-212ENST00000621131 RPLP2P05387 115 aaKnown RBP6.52□□□□□ -1.37
VPS29-212ENST00000621131 ANXA11P50995 505 aaKnown RBP6.52□□□□□ -1.37
VPS29-212ENST00000621131 NHLH1Q02575 133 aa6.52□□□□□ -1.37
VPS29-212ENST00000621131 TSHZ1Q6ZSZ6 1077 aa6.52□□□□□ -1.37
VPS29-212ENST00000621131 PNMA8AQ86V59 439 aaPredicted RBP6.52□□□□□ -1.37
VPS29-212ENST00000621131 SLC17A6Q9P2U8 582 aa6.52□□□□□ -1.37
VPS29-212ENST00000621131 MYO5CQ9NQX4 1742 aa6.52□□□□□ -1.37
VPS29-212ENST00000621131 AKNAQ7Z591 1439 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 PREX2Q70Z35 1606 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 CDC42BPAQ5VT25 1732 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 PRSS29PA6NIE9 313 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 E9PLN8 166 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 MC2RQ01718 297 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 PTPRRQ15256 657 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 UAP1L1Q3KQV9 507 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 ARHGEF25Q86VW2 580 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 ADGRG5Q8IZF4 528 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 LPIN2Q92539 896 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 VKORC1Q9BQB6 163 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 KLK15Q9H2R5 256 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 MAN1C1Q9NR34 630 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 SIDT1Q9NXL6 827 aaKnown RBP6.51□□□□□ -1.37
VPS29-212ENST00000621131 CAMSAP2Q08AD1 1489 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 CROCC2H7BZ55 1655 aa6.51□□□□□ -1.37
VPS29-212ENST00000621131 HFM1A2PYH4 1435 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 RAB3GAP2Q9H2M9 1393 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 LRRC3CA6NJW4 275 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 E7ENX8 843 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 LPOP22079 712 aaPredicted RBP6.5□□□□□ -1.37
VPS29-212ENST00000621131 CYP2C19P33261 490 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 HNRNPMP52272 730 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS29-212ENST00000621131 TAP2Q03519 686 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 PIGFQ07326 219 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 HLXQ14774 488 aaPredicted RBP6.5□□□□□ -1.37
VPS29-212ENST00000621131 KAZNQ674X7 775 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 MICALCLQ6ZW33 695 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 PDSS2Q86YH6 399 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 AOPEPQ8N6M6 819 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 POC1BQ8TC44 478 aa6.5□□□□□ -1.37
VPS29-212ENST00000621131 SPATA5L1Q9BVQ7 753 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms