RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 C7orf43Q8WVR3 580 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 DIS3Q9Y2L1 958 aaKnown RBP10.92□□□□□ -0.66
VPS11-207ENST00000620429 SNX24Q9Y343 169 aa10.92□□□□□ -0.66
VPS11-207ENST00000620429 SBF1O95248 1867 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 LAMB1P07942 1786 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 CCDC160A6NGH7 325 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 TCEA3O75764 348 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 ZNF12P17014 697 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 AMPD1P23109 780 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 ATP2B4P23634 1241 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 PHBP35232 272 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 PPP4CP60510 307 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 KYNUQ16719 465 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 MYLK3Q32MK0 819 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 TMCO4Q5TGY1 634 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 FYB2Q5VWT5 728 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 KCNK18Q7Z418 384 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 DDHD1Q8NEL9 900 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 NSL1Q96IY1 281 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 LBHD1Q9BQE6 289 aaPredicted RBP10.91□□□□□ -0.66
VPS11-207ENST00000620429 NUDT12Q9BQG2 462 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 TMEM47Q9BQJ4 181 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 MRPS26Q9BYN8 205 aaKnown RBP10.91□□□□□ -0.66
VPS11-207ENST00000620429 LRRC27Q9C0I9 530 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 TMEM260Q9NX78 707 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 AK5Q9Y6K8 562 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 DYTNA2CJ06 578 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 TNFRSF10AO00220 468 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 IL1R1P14778 569 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 POLR2EP19388 210 aaKnown RBP10.91□□□□□ -0.66
VPS11-207ENST00000620429 GTF2IP78347 998 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 GSTO1P78417 241 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 PTK2Q05397 1052 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 COASYQ13057 564 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 MAPK7Q13164 816 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 RRP1BQ14684 758 aaKnown RBP10.91□□□□□ -0.66
VPS11-207ENST00000620429 TRMT5Q32P41 509 aaKnown RBP10.91□□□□□ -0.66
VPS11-207ENST00000620429 FAM26FQ5R3K3 315 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 KRT79Q5XKE5 535 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 C15orf52Q6ZUT6 534 aaKnown RBP10.91□□□□□ -0.66
VPS11-207ENST00000620429 SCYL3Q8IZE3 742 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 ZNF444Q8N0Y2 327 aaPredicted RBP10.91□□□□□ -0.66
VPS11-207ENST00000620429 REXO1Q8N1G1 1221 aaKnown RBP10.91□□□□□ -0.66
VPS11-207ENST00000620429 HES6Q96HZ4 224 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 ARMCX3Q9UH62 379 aaPredicted RBP10.91□□□□□ -0.66
VPS11-207ENST00000620429 LGALS13Q9UHV8 139 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 MAST2Q6P0Q8 1798 aa10.91□□□□□ -0.66
VPS11-207ENST00000620429 PPARGP37231 505 aaPredicted RBP10.9□□□□□ -0.66
VPS11-207ENST00000620429 SEPT7Q16181 437 aaKnown RBP10.9□□□□□ -0.66
VPS11-207ENST00000620429 PCNX4Q63HM2 1172 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 PEX26Q7Z412 305 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 LRRC6Q86X45 466 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 TRIM59Q8IWR1 403 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 ZNF713Q8N859 430 aaPredicted RBP10.9□□□□□ -0.66
VPS11-207ENST00000620429 TPCN2Q8NHX9 752 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 BTBD9Q96Q07 612 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 MTMR9Q96QG7 549 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 RAB34Q9BZG1 259 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 TAS2R1Q9NYW7 299 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.9□□□□□ -0.66
VPS11-207ENST00000620429 FBXO9Q9UK97 447 aaPredicted RBP10.9□□□□□ -0.66
VPS11-207ENST00000620429 C15orf38-AP3S2A0A0A6YYH1 394 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 SLC37A4O43826 429 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 FKBP6O75344 327 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 TDP2O95551 362 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 TTLL1O95922 423 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 FGGP02679 453 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 SLURP2P0DP57 97 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 HOXD10P28358 340 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 PHKA2P46019 1235 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 CDK8P49336 464 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 WDR4P57081 412 aaKnown RBP10.9□□□□□ -0.66
VPS11-207ENST00000620429 KCNC4Q03721 635 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 DNAJC3Q13217 504 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 CLUL1Q15846 466 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 ZNF571Q7Z3V5 609 aaPredicted RBP10.9□□□□□ -0.66
VPS11-207ENST00000620429 ARPINQ7Z6K5 226 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 MTDHQ86UE4 582 aaKnown RBP10.9□□□□□ -0.66
VPS11-207ENST00000620429 ZNF410Q86VK4 478 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 SYCE1Q8N0S2 351 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 SLC43A3Q8NBI5 491 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 DDI1Q8WTU0 396 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 CEP63Q96MT8 703 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 OSBPL6Q9BZF3 934 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 GANQ9H2C0 597 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 NR2E1Q9Y466 385 aa10.9□□□□□ -0.66
VPS11-207ENST00000620429 PODXLO00592 558 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 ZBED4O75132 1171 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 CNOT3O75175 753 aaKnown RBP10.89□□□□□ -0.67
VPS11-207ENST00000620429 BBOX1O75936 387 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 LDHCP07864 332 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 ACTN1P12814 892 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 PTGIRP43119 386 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
VPS11-207ENST00000620429 VCPP55072 806 aaKnown RBP10.89□□□□□ -0.67
VPS11-207ENST00000620429 ACTR3P61158 418 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 RPS3AP61247 264 aaKnown RBP10.89□□□□□ -0.67
VPS11-207ENST00000620429 ARHGAP4P98171 946 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 PICALMQ13492 652 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 E2F2Q14209 437 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms