RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 C10orf82Q8WW14 230 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 PDLIM7Q9NR12 457 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 SEPT9Q9UHD8 586 aaPredicted RBP21.54■■□□□ 1.04
NEK3-208ENST00000618534 TRPC5Q9UL62 973 aaPredicted RBP21.54■■□□□ 1.04
NEK3-208ENST00000618534 ZBTB12Q9Y330 459 aaPredicted RBP21.54■■□□□ 1.04
NEK3-208ENST00000618534 IVNS1ABPQ9Y6Y0 642 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 DCTN3O75935 186 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 MORF4L2Q15014 288 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 RNASEH2BQ5TBB1 312 aaKnown RBP21.53■■□□□ 1.04
NEK3-208ENST00000618534 ZNF449Q6P9G9 518 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 DRICH1Q6PGQ1 229 aaPredicted RBP21.53■■□□□ 1.04
NEK3-208ENST00000618534 TRIM6Q9C030 488 aaPredicted RBP21.53■■□□□ 1.04
NEK3-208ENST00000618534 SENP1Q9P0U3 644 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 ZNF541Q9H0D2 1346 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 TYROBPO43914 113 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 DGAT1O75907 488 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 T-ENOLP0DO92 83 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 CCNG1P51959 295 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 SP4Q02446 784 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 TXNRD3NBQ6F5E7 133 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 SWSAP1Q6NVH7 229 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 SPOCD1Q6ZMY3 1216 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 MCPH1Q8NEM0 835 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 RDM1Q8NG50 284 aa21.53■■□□□ 1.04
NEK3-208ENST00000618534 SLC7A6OSQ96CW6 309 aaPredicted RBP21.53■■□□□ 1.04
NEK3-208ENST00000618534 MAK16Q9BXY0 300 aaKnown RBP21.53■■□□□ 1.04
NEK3-208ENST00000618534 MAP3K20Q9NYL2 800 aaKnown RBP21.53■■□□□ 1.04
NEK3-208ENST00000618534 AGO2Q9UKV8 859 aaKnown RBP21.53■■□□□ 1.04
NEK3-208ENST00000618534 ALOX15BO15296 676 aa21.52■■□□□ 1.04
NEK3-208ENST00000618534 CBX6O95503 412 aa21.52■■□□□ 1.04
NEK3-208ENST00000618534 NOP14P78316 857 aaKnown RBP21.52■■□□□ 1.04
NEK3-208ENST00000618534 PDIA2Q13087 525 aaKnown RBP21.52■■□□□ 1.04
NEK3-208ENST00000618534 ZBTB41Q5SVQ8 909 aa21.52■■□□□ 1.04
NEK3-208ENST00000618534 HHATQ5VTY9 493 aa21.52■■□□□ 1.04
NEK3-208ENST00000618534 ANKMY2Q8IV38 441 aa21.52■■□□□ 1.04
NEK3-208ENST00000618534 ATP6V0A1Q93050 837 aa21.52■■□□□ 1.04
NEK3-208ENST00000618534 HAPLN2Q9GZV7 340 aa21.52■■□□□ 1.04
NEK3-208ENST00000618534 NUB1Q9Y5A7 615 aa21.52■■□□□ 1.04
NEK3-208ENST00000618534 TMEM191CA6NGB0 347 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 F8VP50 259 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 GOLGA8SH3BPF8 625 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 GOLGA8MH3BSY2 632 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 PEX11AO75192 247 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 TMEM191BP0C7N4 346 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 ALDH3A1P30838 453 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 PSEN1P49768 467 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 OASLQ15646 514 aaKnown RBP21.51■■□□□ 1.03
NEK3-208ENST00000618534 WDR72Q3MJ13 1102 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 OTOAQ7RTW8 1153 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 FAM13CQ8NE31 585 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 INPP5DQ92835 1189 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 TMEM121Q9BTD3 319 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 RNPEPL1Q9HAU8 725 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 PSMC3IPQ9P2W1 217 aaPredicted RBP21.51■■□□□ 1.03
NEK3-208ENST00000618534 SCAF8Q9UPN6 1271 aaKnown RBP21.51■■□□□ 1.03
NEK3-208ENST00000618534 NEBLO76041 1014 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 GM2AP17900 193 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 VCPP55072 806 aaKnown RBP21.51■■□□□ 1.03
NEK3-208ENST00000618534 SCARA3Q6AZY7 606 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 LVRNQ6Q4G3 990 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 CENPUQ71F23 418 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 ZBTB45Q96K62 511 aaPredicted RBP21.51■■□□□ 1.03
NEK3-208ENST00000618534 MCEEQ96PE7 176 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 GMLQ99445 158 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 TBC1D10AQ9BXI6 508 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 RBAKQ9NYW8 714 aaPredicted RBP21.51■■□□□ 1.03
NEK3-208ENST00000618534 PSME4Q14997 1843 aa21.51■■□□□ 1.03
NEK3-208ENST00000618534 IFNB1P01574 187 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 MMP8P22894 467 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 RTP1P59025 263 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 PRKCEQ02156 737 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 OGDHQ02218 1023 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 EFTUD2Q15029 972 aaKnown RBP eCLIP21.5■■□□□ 1.03
NEK3-208ENST00000618534 LONP2Q86WA8 852 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 CYP26B1Q9NR63 512 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 SHOC2Q9UQ13 582 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 DOCK5Q9H7D0 1870 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 hCG_1818297A0A087WSY0 165 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 SGK1O00141 431 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 GNAZP19086 355 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 EPHB2P29323 1055 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 GPX6P59796 221 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 GAD2Q05329 585 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 MCL1Q07820 350 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 TAF11Q15544 211 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 KRT27Q7Z3Y8 459 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 CCDC60Q8IWA6 550 aaPredicted RBP21.5■■□□□ 1.03
NEK3-208ENST00000618534 ZNF75CPQ92670 426 aaPredicted RBP21.5■■□□□ 1.03
NEK3-208ENST00000618534 SLC24A2Q9UI40 661 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 CNTN6Q9UQ52 1028 aa21.5■■□□□ 1.03
NEK3-208ENST00000618534 DRG1Q9Y295 367 aaKnown RBP21.5■■□□□ 1.03
NEK3-208ENST00000618534 PIAS1O75925 651 aa21.49■■□□□ 1.03
NEK3-208ENST00000618534 KRT4P19013 534 aa21.49■■□□□ 1.03
NEK3-208ENST00000618534 SUPT20HQ8NEM7 779 aa21.49■■□□□ 1.03
NEK3-208ENST00000618534 OR5B17Q8NGF7 314 aa21.49■■□□□ 1.03
NEK3-208ENST00000618534 ZNF606Q8WXB4 792 aa21.49■■□□□ 1.03
NEK3-208ENST00000618534 CYLDQ9NQC7 956 aa21.49■■□□□ 1.03
NEK3-208ENST00000618534 CYP39A1Q9NYL5 469 aa21.49■■□□□ 1.03
NEK3-208ENST00000618534 LRRD1A4D1F6 860 aa21.49■■□□□ 1.03
NEK3-208ENST00000618534 ZBED4O75132 1171 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms