RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PDGFCQ9NRA1 345 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 PRG3Q9Y2Y8 225 aaPredicted RBP14.62□□□□□ -0.07
CIITA-213ENST00000618327 APOEP02649 317 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 RTP1P59025 263 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 MEA1Q16626 185 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 ZNF710Q8N1W2 664 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 GSDMBQ8TAX9 411 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 L2HGDHQ9H9P8 463 aa14.62□□□□□ -0.07
CIITA-213ENST00000618327 METTL5Q9NRN9 209 aaKnown RBP14.62□□□□□ -0.07
CIITA-213ENST00000618327 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.62□□□□□ -0.07
CIITA-213ENST00000618327 HMGB1P1B2RPK0 211 aaPredicted RBP14.61□□□□□ -0.07
CIITA-213ENST00000618327 KCNA2P16389 499 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 PMS2P54278 862 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 DLG4P78352 724 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 IL9RQ01113 521 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 CAPSQ13938 189 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 SH2D4BQ5SQS7 431 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 RASIP1Q5U651 963 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 RUBCNQ92622 972 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 RILPQ96NA2 401 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 RAB3IPQ96QF0 476 aaPredicted RBP14.61□□□□□ -0.07
CIITA-213ENST00000618327 ITGA11Q9UKX5 1188 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 NRCAMQ92823 1304 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 MT-ND3P03897 115 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 ZBTB48P10074 688 aaPredicted RBP14.61□□□□□ -0.07
CIITA-213ENST00000618327 RALAP11233 206 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 NR1D1P20393 614 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 GPD1P21695 349 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 RAP1GAPP47736 663 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 EIF3EP60228 445 aaKnown RBP14.61□□□□□ -0.07
CIITA-213ENST00000618327 RYBPQ8N488 228 aaPredicted RBP14.61□□□□□ -0.07
CIITA-213ENST00000618327 NOA1Q8NC60 698 aaKnown RBP14.61□□□□□ -0.07
CIITA-213ENST00000618327 BAZ2AQ9UIF9 1905 aaKnown RBP14.61□□□□□ -0.07
CIITA-213ENST00000618327 MAPK13O15264 365 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 TGFB1I1O43294 461 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 THP07101 528 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 FAM200BP0CF97 657 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 ARSEP51690 589 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 HSDL1Q3SXM5 330 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 IZUMO3Q5VZ72 239 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 ELMSAN1Q6PJG2 1045 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 DCP1BQ8IZD4 617 aaKnown RBP14.61□□□□□ -0.07
CIITA-213ENST00000618327 LRRC8CQ8TDW0 803 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 ZNF518BQ9C0D4 1074 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 PCDHB7Q9Y5E2 793 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 BTAF1O14981 1849 aa14.61□□□□□ -0.07
CIITA-213ENST00000618327 NCKAP1LP55160 1127 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 VEPH1Q14D04 833 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 ELMO3Q96BJ8 720 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 SCYL1Q96KG9 808 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 PFDN4Q9NQP4 134 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 C10orf71Q711Q0 1435 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 TFRCP02786 760 aaKnown RBP14.6□□□□□ -0.07
CIITA-213ENST00000618327 ADRB2P07550 413 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 RRM1P23921 792 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 AP1B1Q10567 949 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 EFHC1Q5JVL4 640 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 SPRYD7Q5W111 196 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 BTBD6Q96KE9 485 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 EPAS1Q99814 870 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 OSGEPQ9NPF4 335 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 BCAP29Q9UHQ4 241 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 MYH3P11055 1940 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 ODC1P11926 461 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 C4orf50Q6ZRC1 276 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 ELMOD1Q8N336 334 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 PPP4R1Q8TF05 950 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 MBOAT7Q96N66 472 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 ZSWIM1Q9BR11 485 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 UBR2Q8IWV8 1755 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 A0A0A6YYK5 440 aaPredicted RBP14.6□□□□□ -0.07
CIITA-213ENST00000618327 LACTBL1A8MY62 500 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 CYB561D2O14569 222 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 AXLP30530 894 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 PTPN11Q06124 597 aaPredicted RBP14.6□□□□□ -0.07
CIITA-213ENST00000618327 BFSP2Q13515 415 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 SNCBQ16143 134 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 FBXO47Q5MNV8 452 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 FAM117BQ6P1L5 589 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 DNAAF5Q86Y56 855 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 TMEM176AQ96HP8 235 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 APBA2Q99767 749 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 TRIM51Q9BSJ1 452 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 CNOT10Q9H9A5 744 aaKnown RBP14.6□□□□□ -0.07
CIITA-213ENST00000618327 PLEKHA5Q9HAU0 1116 aa14.6□□□□□ -0.07
CIITA-213ENST00000618327 PHF20L1A8MW92 1017 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 GGCXP38435 758 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 IRX4P78413 519 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 NOGQ13253 232 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 THOC5Q13769 683 aaKnown RBP14.59□□□□□ -0.07
CIITA-213ENST00000618327 RBBP5Q15291 538 aaKnown RBP14.59□□□□□ -0.07
CIITA-213ENST00000618327 DCAF6Q58WW2 860 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 SYDE1Q6ZW31 735 aaPredicted RBP14.59□□□□□ -0.07
CIITA-213ENST00000618327 RAPH1Q70E73 1250 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 EFCAB13Q8IY85 973 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 ABRAQ8N0Z2 381 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 TTC25Q96NG3 672 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 FGFBP2Q9BYJ0 223 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 AKAP5P24588 427 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 CACNB2Q08289 660 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms