RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MYBL1P10243 752 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 CETPP11597 493 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 HSPA6P17066 643 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 SMPD1P17405 629 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 POLR2BP30876 1174 aaKnown RBP13.16□□□□□ -0.3
CIITA-212ENST00000618207 SLC26A2P50443 739 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 OGDHQ02218 1023 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 SLC29A2Q14542 456 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 WDTC1Q8N5D0 677 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 SDCBP2Q9H190 292 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 SYNCQ9H7C4 482 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 TMBIM4Q9HC24 238 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 PARVAQ9NVD7 372 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 PCYOX1Q9UHG3 505 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 CPA4Q9UI42 421 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 IQCA1LA6NCM1 817 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 BHMG1C9JSJ3 638 aaPredicted RBP13.15□□□□□ -0.3
CIITA-212ENST00000618207 PROZP22891 400 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 MMP8P22894 467 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 PMS2P54278 862 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 KCNT1Q5JUK3 1230 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 PLEKHA7Q6IQ23 1121 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 TRIM72Q6ZMU5 477 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 RHOT1Q8IXI2 618 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 TMEM35BQ8NCS4 154 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 C16orf70Q9BSU1 422 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 CALCOCO1Q9P1Z2 691 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 AGAP1Q9UPQ3 857 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 TNFSF13BQ9Y275 285 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 DYNC1LI2O43237 492 aaPredicted RBP13.15□□□□□ -0.3
CIITA-212ENST00000618207 CELF2O95319 508 aaKnown RBP13.15□□□□□ -0.3
CIITA-212ENST00000618207 CCT5P48643 541 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 ENPEPQ07075 957 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.3
CIITA-212ENST00000618207 GLRA4Q5JXX5 417 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 PHF13Q86YI8 300 aaPredicted RBP13.15□□□□□ -0.3
CIITA-212ENST00000618207 EXOC8Q8IYI6 725 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 TAB3Q8N5C8 712 aaPredicted RBP13.15□□□□□ -0.3
CIITA-212ENST00000618207 OR6J1Q8NGC5 347 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 NPLOC4Q8TAT6 608 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 PTPN18Q99952 460 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 PDZD7Q9H5P4 517 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 PRMT7Q9NVM4 692 aaPredicted RBP13.15□□□□□ -0.3
CIITA-212ENST00000618207 PASKQ96RG2 1323 aa13.15□□□□□ -0.3
CIITA-212ENST00000618207 PODXLO00592 558 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 FSCN2O14926 492 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 ZNF132P52740 706 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 SEC24CP53992 1094 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 MAGOHP61326 146 aaKnown RBP13.14□□□□□ -0.31
CIITA-212ENST00000618207 DYNLT1P63172 113 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 ZNF252P-AS1Q0IIN9 211 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 CALCOCO2Q13137 446 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 SLC10A6Q3KNW5 377 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 MTHFD1LQ6UB35 978 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 GSTA5Q7RTV2 222 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 UBA3Q8TBC4 463 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 OSBPL8Q9BZF1 889 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 ZWILCHQ9H900 591 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 PPANQ9NQ55 473 aaKnown RBP13.14□□□□□ -0.31
CIITA-212ENST00000618207 CYTH4Q9UIA0 394 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 CNTN6Q9UQ52 1028 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 SCINQ9Y6U3 715 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 ANK1P16157 1881 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 B4GALT4O60513 344 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 CAND2O75155 1236 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 ACSL3O95573 720 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 KRT1P04264 644 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 ADCY8P40145 1251 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 SLC1A1P43005 524 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 AP3M2P53677 418 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 MTMR3Q13615 1198 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 CLUL1Q15846 466 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 GRIK4Q16099 956 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 PTPN20Q4JDL3 420 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 ZNF484Q5JVG2 852 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 SHCBP1Q8NEM2 672 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 PPTC7Q8NI37 304 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.14□□□□□ -0.31
CIITA-212ENST00000618207 GBA2Q9HCG7 927 aaPredicted RBP13.14□□□□□ -0.31
CIITA-212ENST00000618207 MTRF1LQ9UGC7 380 aaKnown RBP13.14□□□□□ -0.31
CIITA-212ENST00000618207 CEP83Q9Y592 693 aa13.14□□□□□ -0.31
CIITA-212ENST00000618207 LRRD1A4D1F6 860 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
CIITA-212ENST00000618207 RFC1P35251 1148 aaPredicted RBP13.13□□□□□ -0.31
CIITA-212ENST00000618207 GTF2A2P52657 109 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 C1QBPQ07021 282 aaKnown RBP13.13□□□□□ -0.31
CIITA-212ENST00000618207 SURF1Q15526 300 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 AMHR2Q16671 573 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 DENND2CQ68D51 928 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 MFSD7Q6UXD7 560 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 UBR7Q8N806 425 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 JOSD2Q8TAC2 188 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 MAML3Q96JK9 1138 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 C10orf88Q9H8K7 445 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 CDHR5Q9HBB8 845 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 SAE1Q9UBE0 346 aaPredicted RBP13.13□□□□□ -0.31
CIITA-212ENST00000618207 PCSK1NQ9UHG2 260 aa13.13□□□□□ -0.31
CIITA-212ENST00000618207 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms