RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 USP32Q8NFA0 1604 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 PASKQ96RG2 1323 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 PER2O15055 1255 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 TEX33O43247 280 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 DDX5P17844 614 aaKnown RBP11.5□□□□□ -0.57
POLR2A-209ENST00000617998 PTPN11Q06124 597 aaPredicted RBP11.5□□□□□ -0.57
POLR2A-209ENST00000617998 LBX2Q6XYB7 198 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 MICALCLQ6ZW33 695 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 CXorf40AQ8TE69 158 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 WDCPQ9H6R7 721 aa11.5□□□□□ -0.57
POLR2A-209ENST00000617998 UTP6Q9NYH9 597 aaKnown RBP11.5□□□□□ -0.57
POLR2A-209ENST00000617998 INPP4BO15327 924 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 IFNA8P32881 189 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 GRIK3Q13003 919 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 FBF1Q8TES7 1133 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 UBXN6Q9BZV1 441 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 EPB41L4AQ9HCS5 686 aaPredicted RBP11.49□□□□□ -0.57
POLR2A-209ENST00000617998 THEGQ9P2T0 379 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 DEC1Q9P2X7 70 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 AK5Q9Y6K8 562 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TBC1D3DA0A087WVF3 549 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TBC1D3IA0A087WXS9 549 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TBC1D3EA0A087X179 549 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TBC1D3KA0A087X1G2 549 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TBC1D3FA6NER0 549 aaPredicted RBP11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TBC1D3LB9A6J9 549 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TBC1D3HP0C7X1 549 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 ZFXP17010 805 aaPredicted RBP11.49□□□□□ -0.57
POLR2A-209ENST00000617998 PAX3P23760 479 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 MTFR1Q15390 333 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TBC1D3GQ6DHY5 549 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TBC1D3CQ6IPX1 549 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TBC1D3Q8IZP1 549 aaPredicted RBP11.49□□□□□ -0.57
POLR2A-209ENST00000617998 ANKLE1Q8NAG6 615 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 OR8K1Q8NGG5 319 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 PSMB7Q99436 277 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 EEF2KO00418 725 aaKnown RBP11.49□□□□□ -0.57
POLR2A-209ENST00000617998 ARHGAP6O43182 974 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 WEE2P0C1S8 567 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 SEC13P55735 322 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 MTA1Q13330 715 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TRIM72Q6ZMU5 477 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TSHZ1Q6ZSZ6 1077 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 PRPF39Q86UA1 669 aaKnown RBP11.49□□□□□ -0.57
POLR2A-209ENST00000617998 OSCP1Q8WVF1 389 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TLR9Q9NR96 1032 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 DDIT4Q9NX09 232 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 BAG5Q9UL15 447 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 CBX4O00257 560 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 CHKAP35790 457 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 USP39Q53GS9 565 aaKnown RBP11.49□□□□□ -0.57
POLR2A-209ENST00000617998 GRAMD4Q6IC98 578 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 FAM133AQ8N9E0 248 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 ELOVL4Q9GZR5 314 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 MAD2L2Q9UI95 211 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 CRLS1Q9UJA2 301 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 PADI3Q9ULW8 664 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 PCBP1Q15365 356 aaKnown RBP eCLIP11.49□□□□□ -0.572e-7■■■■■ 33.8
POLR2A-209ENST00000617998 DCLRE1AQ6PJP8 1040 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 GIT1Q9Y2X7 761 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 TAL1P17542 331 aaPredicted RBP11.49□□□□□ -0.57
POLR2A-209ENST00000617998 MARSP56192 900 aaKnown RBP11.49□□□□□ -0.57
POLR2A-209ENST00000617998 HECTD3Q5T447 861 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 SPATA1Q5VX52 437 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 ANKS6Q68DC2 871 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 UBA3Q8TBC4 463 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 RAB3IPQ96QF0 476 aaPredicted RBP11.49□□□□□ -0.57
POLR2A-209ENST00000617998 BBS2Q9BXC9 721 aa11.49□□□□□ -0.57
POLR2A-209ENST00000617998 ZNF609O15014 1411 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 NPHP3-ACAD11A0A0J9YXS1 232 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 PDE2AO00408 941 aaPredicted RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 IFRD1O00458 451 aaPredicted RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 RASSF9O75901 435 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 SGMS1Q86VZ5 419 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 BBOF1Q8ND07 529 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 USP33Q8TEY7 942 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 TRMT61BQ9BVS5 477 aaKnown RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 RANBP17Q9H2T7 1088 aaKnown RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 CWC15Q9P013 229 aaKnown RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 DNAI1Q9UI46 699 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 PVALEFA0A1B0GWK0 134 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 KCNK3O14649 394 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 CHEK2O96017 543 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 SMYD4Q8IYR2 804 aaPredicted RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 C16orf45Q96MC5 204 aaPredicted RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 OXCT2Q9BYC2 517 aaPredicted RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 WTIPA6NIX2 430 aaPredicted RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 MTA2O94776 668 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 IL1BP01584 269 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 CDC27P30260 824 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 SREBF1P36956 1147 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 PTGER2P43116 358 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 NAALADL2Q58DX5 795 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 ACOT1Q86TX2 421 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 ZNF189O75820 626 aaPredicted RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 RECQL4O94761 1208 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 EPB42P16452 691 aa11.48□□□□□ -0.57
POLR2A-209ENST00000617998 PBLDP30039 288 aaPredicted RBP11.48□□□□□ -0.57
POLR2A-209ENST00000617998 ACOX1Q15067 660 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms