RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 GNL1P36915 607 aaPredicted RBP16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 LHX1P48742 406 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 SMC1AQ14683 1233 aaKnown RBP16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 PTPN14Q15678 1187 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 PSMD5Q16401 504 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 CTXN3Q4LDR2 81 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 KLHDC7AQ5VTJ3 777 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 SARM1Q6SZW1 724 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 ANKS3Q6ZW76 656 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 THEM5Q8N1Q8 247 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 MRPL43Q8N983 215 aaKnown RBP16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 OR6B3Q8NGW1 331 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 KBTBD7Q8WVZ9 684 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 ARID3AQ99856 593 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 SNX25Q9H3E2 840 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 DDX43Q9NXZ2 648 aaKnown RBP16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 APEX2Q9UBZ4 518 aa16.71■□□□□ 0.27
PCDHGC3-204ENST00000617222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 GABRDO14764 452 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 HCRTO43612 131 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 TPM3P06753 285 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 PDGFRBP09619 1106 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 RPL17P18621 184 aaKnown RBP16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 CD58P19256 250 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 TBXAS1P24557 533 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 LMO2P25791 158 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 PTPROQ16827 1216 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 PDE12Q6L8Q7 609 aaKnown RBP16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 ZNF280DQ6N043 979 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 PDXDC1Q6P996 788 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 GPR65Q8IYL9 337 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 SPATA18Q8TC71 538 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 MRPL38Q96DV4 380 aaKnown RBP16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 KREMEN1Q96MU8 473 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 RTP3Q9BQQ7 232 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 TRIM5Q9C035 493 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 RXFP1Q9HBX9 757 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 PLCB1Q9NQ66 1216 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 FAM207AQ9NSI2 230 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 MTRRQ9UBK8 725 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 DNAJC12Q9UKB3 198 aa16.7■□□□□ 0.26
PCDHGC3-204ENST00000617222 A0A1W2PQC6 194 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 C2orf71A6NGG8 1288 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 HIDE1A8MVS5 230 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 TBC1D4O60343 1298 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 NOL4O94818 638 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 ACAT1P24752 427 aaKnown RBP16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 MFAP3P55082 362 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 ARPP19P56211 112 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 GCNT1Q02742 428 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 ARHGAP44Q17R89 818 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 IQCEQ6IPM2 695 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 GPR153Q6NV75 609 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 RSPO2Q6UXX9 243 aaPredicted RBP16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 Q7L0L9 218 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 GLYCTKQ8IVS8 523 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 NEK11Q8NG66 645 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 KLHL5Q96PQ7 755 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 CISHQ9NSE2 258 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 FBXL5Q9UKA1 691 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 AJAP1Q9UKB5 411 aaPredicted RBP16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 BARX2Q9UMQ3 279 aaPredicted RBP16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 NME7Q9Y5B8 376 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 BACE2Q9Y5Z0 518 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 IRAK3Q9Y616 596 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 NLRC5Q86WI3 1866 aa16.69■□□□□ 0.26
PCDHGC3-204ENST00000617222 OR6C75A6NL08 312 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 A8MXQ7 604 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 EPHB6O15197 1021 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 ADAM12O43184 909 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 CNPP09543 421 aaKnown RBP16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 UCHL3P15374 230 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 PBX1P40424 430 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 POLR2FP61218 127 aaKnown RBP16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 YWHAEP62258 255 aaKnown RBP16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 ENOSF1Q7L5Y1 443 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 UBR7Q8N806 425 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 OR10T2Q8NGX3 314 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 FAM81BQ96LP2 452 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 TMEM209Q96SK2 561 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 EMILIN2Q9BXX0 1053 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 GANQ9H2C0 597 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 FNIP2Q9P278 1114 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 STXBP5LQ9Y2K9 1186 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 PCDHB4Q9Y5E5 795 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 FHOD1Q9Y613 1164 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 CDY1Q9Y6F8 540 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 LAMA3Q16787 3333 aa16.68■□□□□ 0.26
PCDHGC3-204ENST00000617222 MYO9BQ13459 2157 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 GOLGA6L3A6NEY3 463 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 TEX28O15482 410 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 CILPO75339 1184 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 OR4Q2P0C623 313 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 ACO1P21399 889 aaKnown RBP16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 IGFBP4P22692 258 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 PCSK1P29120 753 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 OR1D2P34982 312 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 FXR1P51114 621 aaKnown RBP eCLIP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms