RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 ELNP15502 786 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 CDH3P22223 829 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 KCNJ8Q15842 424 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 VWA3BQ502W6 1294 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 PPP4R4Q6NUP7 873 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 UNC13DQ70J99 1090 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 ANKRD13CQ8N6S4 541 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 HMG20BQ9P0W2 317 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 RPL26L1Q9UNX3 145 aaKnown RBP16.13■□□□□ 0.17
NOP56-220ENST00000616692 ATAD5Q96QE3 1844 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 A8MX80 341 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 XPOTO43592 962 aaKnown RBP16.13■□□□□ 0.17
NOP56-220ENST00000616692 DKC1O60832 514 aaKnown RBP eCLIP16.13■□□□□ 0.172e-14■□□□□ 9.6
NOP56-220ENST00000616692 SLC1A1P43005 524 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 SF3B4Q15427 424 aaKnown RBP eCLIP16.13■□□□□ 0.171e-11■■■■□ 19.7
NOP56-220ENST00000616692 PRR23CQ6ZRP0 262 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 AGGF1Q8N302 714 aaeCLIP16.13■□□□□ 0.17
NOP56-220ENST00000616692 MRPS27Q92552 414 aaKnown RBP16.13■□□□□ 0.17
NOP56-220ENST00000616692 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 PCDHB4Q9Y5E5 795 aa16.13■□□□□ 0.17
NOP56-220ENST00000616692 OR5K4A6NMS3 321 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 ASNSP08243 561 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 M6PRP20645 277 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 MAPK4P31152 587 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 NR2C2P49116 596 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 CLK3P49761 638 aaKnown RBP16.12■□□□□ 0.17
NOP56-220ENST00000616692 MAP3K7CLP57077 242 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 TREML2Q5T2D2 321 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 ZNF572Q7Z3I7 529 aaPredicted RBP16.12■□□□□ 0.17
NOP56-220ENST00000616692 MMAAQ8IVH4 418 aaKnown RBP16.12■□□□□ 0.17
NOP56-220ENST00000616692 LRRC34Q8IZ02 419 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 RBM14Q96PK6 669 aaKnown RBP16.12■□□□□ 0.17
NOP56-220ENST00000616692 SIAEQ9HAT2 523 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 METTL5Q9NRN9 209 aaKnown RBP16.12■□□□□ 0.17
NOP56-220ENST00000616692 NEDD4P46934 1319 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 OCM2P0CE71 109 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 OCMP0CE72 109 aaPredicted RBP16.12■□□□□ 0.17
NOP56-220ENST00000616692 TIMM10P62072 90 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 TFCP2Q12800 502 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 SPP2Q13103 211 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 MOGQ16653 247 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 LRIT3Q3SXY7 679 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 SGO2Q562F6 1265 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 LRRC74BQ6ZQY2 392 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 PA2G4Q9UQ80 394 aaKnown RBP16.12■□□□□ 0.17
NOP56-220ENST00000616692 MYH15Q9Y2K3 1946 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 OAS1P00973 400 aaKnown RBP16.12■□□□□ 0.17
NOP56-220ENST00000616692 FAM153BP0C7A2 387 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 IST1P53990 364 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 PLCB3Q01970 1234 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 RNASELQ05823 741 aaKnown RBP16.12■□□□□ 0.17
NOP56-220ENST00000616692 AP1B1Q10567 949 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 SF3A3Q12874 501 aaKnown RBP eCLIP16.12■□□□□ 0.176e-17■■■□□ 18
NOP56-220ENST00000616692 PICALMQ13492 652 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 FAM153CQ494X1 144 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 CCDC58Q4VC31 144 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 HAUS3Q68CZ6 603 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 FAM47EQ6ZV65 393 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 HS2ST1Q7LGA3 356 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 TTC8Q8TAM2 541 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 NRG4Q8WWG1 115 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 COQ7Q99807 217 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 GPATCH1Q9BRR8 931 aaKnown RBP16.12■□□□□ 0.17
NOP56-220ENST00000616692 ETNK1Q9HBU6 452 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 ARMC1Q9NVT9 282 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 FAM153AQ9UHL3 310 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 GGT7Q9UJ14 662 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 RWDD3Q9Y3V2 267 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 SPEF1Q9Y4P9 236 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
NOP56-220ENST00000616692 HTTP42858 3142 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 NPHP3-ACAD11A0A0J9YXS1 232 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 TSPY2A6NKD2 308 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 S100A6P06703 90 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 TSPY3P0CV98 308 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 TSPY8P0CW00 308 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 FECHP22830 423 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 GRIA2P42262 883 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 KRT6CP48668 564 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 MLLT6P55198 1093 aaPredicted RBP16.11■□□□□ 0.17
NOP56-220ENST00000616692 TSPY1Q01534 308 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 KRT76Q01546 638 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 CYP4A22Q5TCH4 519 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 IFT20Q8IY31 132 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 ZNF384Q8TF68 577 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 NXPE3Q969Y0 559 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 C11orf49Q9H6J7 331 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 ZC3H7BQ9UGR2 993 aaKnown RBP16.11■□□□□ 0.17
NOP56-220ENST00000616692 GPSM3Q9Y4H4 160 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 ARHGEF15O94989 841 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 OLFM2O95897 454 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 POLR2CP19387 275 aaPredicted RBP16.11■□□□□ 0.17
NOP56-220ENST00000616692 BACE1P56817 501 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 NIPAL1Q6NVV3 410 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 DSTYKQ6XUX3 929 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 METTL3Q86U44 580 aaKnown RBP16.11■□□□□ 0.17
NOP56-220ENST00000616692 FLCNQ8NFG4 579 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 ANGPTL6Q8NI99 470 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 PAWRQ96IZ0 340 aaKnown RBP16.11■□□□□ 0.17
NOP56-220ENST00000616692 MEIS3Q99687 375 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms