RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 SMYD3Q9H7B4 428 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 L1RE1Q9UN81 338 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 PRG3Q9Y2Y8 225 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-217ENST00000616545 PCDHA11Q9Y5I1 949 aa12.44□□□□□ -0.42
TARDBP-217ENST00000616545 MRPL42Q9Y6G3 142 aaKnown RBP12.44□□□□□ -0.42
TARDBP-217ENST00000616545 H0YGN5 161 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 H7C4K7 107 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 MED7O43513 233 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 B4GALT3O60512 393 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 OAZ2O95190 189 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 EFEMP2O95967 443 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 RB1P06400 928 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 FGFR3P22607 806 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 USP8P40818 1118 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 PDE6CP51160 858 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 YWHAHQ04917 246 aaPredicted RBP12.43□□□□□ -0.42
TARDBP-217ENST00000616545 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
TARDBP-217ENST00000616545 SHHQ15465 462 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 MAPRE1Q15691 268 aaKnown RBP12.43□□□□□ -0.42
TARDBP-217ENST00000616545 RAB30Q15771 203 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 SCARA3Q6AZY7 606 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 PPP1R2P3Q6NXS1 205 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 SCARA5Q6ZMJ2 495 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 ANKS3Q6ZW76 656 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 DDX53Q86TM3 631 aaKnown RBP12.43□□□□□ -0.42
TARDBP-217ENST00000616545 CRYBG2Q8N1P7 616 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 OR6B3Q8NGW1 331 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 TMEM169Q96HH4 297 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 TMEM176AQ96HP8 235 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 ACBD6Q9BR61 282 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.421e-7■■■■□ 22.4
TARDBP-217ENST00000616545 MARCH5Q9NX47 278 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 AJAP1Q9UKB5 411 aaPredicted RBP12.43□□□□□ -0.42
TARDBP-217ENST00000616545 LZTS1Q9Y250 596 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 SSX2IPQ9Y2D8 614 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 STXBP5LQ9Y2K9 1186 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 SCN1AP35498 2009 aa12.43□□□□□ -0.42
TARDBP-217ENST00000616545 A8MXQ7 604 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 CYP26A1O43174 497 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 ARHGAP6O43182 974 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 VDRP11473 427 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 CYP11B1P15538 503 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 CD58P19256 250 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 CLCN1P35523 988 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 BRCC3P46736 316 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 NDST1P52848 882 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 RAD23BP54727 409 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 CDH8P55286 799 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 CREMQ03060 361 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 UBE3AQ05086 875 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 SMARCB1Q12824 385 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 BMS1Q14692 1282 aaKnown RBP12.42□□□□□ -0.42
TARDBP-217ENST00000616545 USP41Q3LFD5 358 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 TDRD12Q587J7 1177 aaKnown RBP12.42□□□□□ -0.42
TARDBP-217ENST00000616545 C9orf50Q5SZB4 431 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 WSCD1Q658N2 575 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 OVOS1Q6IE37 1185 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 WDR59Q6PJI9 974 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 TRIM72Q6ZMU5 477 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 RNF168Q8IYW5 571 aaPredicted RBP12.42□□□□□ -0.42
TARDBP-217ENST00000616545 KBTBD7Q8WVZ9 684 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
TARDBP-217ENST00000616545 CCDC42Q96M95 316 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 MRPL45Q9BRJ2 306 aaKnown RBP12.42□□□□□ -0.42
TARDBP-217ENST00000616545 TTPALQ9BTX7 342 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 SDCBP2Q9H190 292 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 CACNG4Q9UBN1 327 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 PUF60Q9UHX1 559 aaKnown RBP12.42□□□□□ -0.42
TARDBP-217ENST00000616545 CDH9Q9ULB4 789 aa12.42□□□□□ -0.42
TARDBP-217ENST00000616545 OR6C75A6NL08 312 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 C5orf67F2Z3F1 127 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 SOD2P04179 222 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 ITGB1P05556 798 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 GNA15P30679 374 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 CYLC1P35663 651 aaPredicted RBP12.41□□□□□ -0.42
TARDBP-217ENST00000616545 BMPR1AP36894 532 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 MRPL58Q14197 206 aaKnown RBP12.41□□□□□ -0.42
TARDBP-217ENST00000616545 SGO2Q562F6 1265 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 FAM171A1Q5VUB5 890 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 HGSNATQ68CP4 663 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 ZNF280DQ6N043 979 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 TMCO2Q7Z6W1 182 aaPredicted RBP12.41□□□□□ -0.42
TARDBP-217ENST00000616545 TXLNBQ8N3L3 684 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 SLC4A11Q8NBS3 891 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 EPS8L1Q8TE68 723 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 WHAMMQ8TF30 809 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 RABGGTAQ92696 567 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 HERC2P3Q9BVR0 1158 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 DEF6Q9H4E7 631 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 HAUS4Q9H6D7 363 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 LUC7LQ9NQ29 371 aaKnown RBP12.41□□□□□ -0.42
TARDBP-217ENST00000616545 DDX43Q9NXZ2 648 aaKnown RBP12.41□□□□□ -0.42
TARDBP-217ENST00000616545 MSRAQ9UJ68 235 aa12.41□□□□□ -0.42
TARDBP-217ENST00000616545 A0A1W2PPC1 479 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 IPO7O95373 1038 aaKnown RBP12.4□□□□□ -0.42
TARDBP-217ENST00000616545 LSM8O95777 96 aaKnown RBP12.4□□□□□ -0.42
TARDBP-217ENST00000616545 LINC00271P0C7V0 271 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 RAP1GAPP47736 663 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 TSPY1Q01534 308 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms